| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1040 |
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| Symbol | |
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| ID | 6026534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1090888 |
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| End bp | 1093344 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641593852 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001717184 |
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| Protein GI | 169831202 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.189081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGCGA TCATCATGGC GGGCGGCGAG GGTTCCCGGC TGCGTCCGCT GACCTGCAAC
CGTCCCAAAC CTATGGTCCC GGTGCTGAAC CGGCCGGTGA TGTCCTACTG CATCGATCTT
CTGAAAAAGC ACGGGATCAC TGAGATCGGG GTCACCCTGC AGTACCTGCC CGAGGCCATC
AAGGAGCACT TCGGTGACGG GTCCGAGTAT GGGGTCCGGC TGCACTACTT TGTCGAGAAC
ACTCCCCTGG GAACGGCCGG CAGCGTAAAG AACGCCGGGG AATTCCTGGA CCGGACCTTT
TTGGTGATCA GCGGCGATGC GCTGACCGAC CTGGACCTGT CAAAAGCGAT CGAGATTCAC
CGGAGTCAGG GTGCGGCCGG CACGCTGGTG CTAACCCGGG TGGAATGCCC GCTGGAATAC
GGGGTGGTGA TTACCGGGGG CGGCGGGCGG ATCATCAGGT TCCTGGAAAA ACCGGGCTGG
GGCGAGGTGT TCAGTGATAC GGTAAACACC GGGATCTACG TCCTGGAACC TGATGTGCTG
AACTATTTTA CCGCCGGCCA GGAGTTTGAC TTCTCAAAAG ACCTTTTCCC GCTATTGATG
CGGGAGAACA GACCGTTGTT CGGGGTAGTG CTTTCCGGTT ACTGGTGCGA CATCGGGAAC
CTGCAGCAGT ATTTGCAGGC GCAGTACGAC GGGCTCGCCG GCAAGGTACG GCTGGAGATT
CCAGGCCGGG AGATTGAACC CGGGGTGTGG GTCGGCGAGC AGGTTGCGCT TGATTCCGGG
GTGACGGTGA AAGGTCCGGT CCTGATCGGG AACCACAGCC ATATCGGAAG CGGGGCGACC
CTGGAACCGT TCACCGTGGT GGGCGACGGG TGCTTCATCC AACCGGGTGC GTCGGTGAAG
CGGAGCATCC TGTGGGAGCG GGTGTTTGTG GGGCGGAACG CGGCCCTCCG CGGCGCGGTC
CTGTGCAGCC GGGTCCAGGT GCAGGCGGAC GCCGGGGTGT ACGAAGGCGC TGTGGTGGGC
GACGGTTCAG TGATCAAAGA AGGGGGGACC ATAAAACCCG AAGTGAAGGT CTGGCCCCAC
AAGCTGGTGG AAAGCGGTGC CACGGTGAGT GAAAGCCTGA TCTGGGGCAC CAGGCTTTCC
AAGAGCGTGT TCGGCGCCCA GGGGATCAGC GGGCTGGTGA ACGTGGAAAT TACCCCCGAA
TTCGCCGGCC GCGTGGCGGC CGCTTACGGC TCCACCCTGA ACGGCGGGCG CGTGGCGGTG
AGTTGCGACG CCTTCCCGCC CAGCGCGATG CTGAAACAGG CGGTAGTGGC CGGTCTCCAG
AGCACCGGGG CCCGGGTGTC CATCCTTGGG CGGGGCATCC TGCCGATGCA CCGGTTCGGC
GTCCGGGCCC TGGAGTGTGC CGGGGGGATG CACGTCCAGC TCTCAACCCG GAAACCGGAC
GTGGTGACGC TGGTGTTCAC TAACTCCAAC GGGGCCAACA TTTCCCGCGC CCAGGAGCGG
AAGATCGAAA ACCTGCTAGC CCGTGAGGAT TTCGTCAGGA CTAAACCCGG ACGGATTTGT
GACCCGGAAT ACGCGCCGGC GATGCCGGAG GCCTATCTAC AAAGCCTGTT GCGGGAAGCC
GACCGCCAGG CCTTGCGGAA TGCGGGTTTC AGCCTGCTGC TGGCCTACGA CGAGGCCAGC
CTGAGTGCCT ACGTGCCCCC GCTGGCCCGC GAACTCGGGC TGACGGTGGA AAACGTCAAT
GGCATTCAGG ATACGGCCCG GGCCCGCAGT TGGTCCGAGT ACCAGGAAAT CTTGCCGCTT
CTGGCCGCGG CCGTGACCAA ACAGAAGGCC GGCGGCGGAG CCGTGCTGGA CGCCAACGGG
GAATACCTGA TCCTGATTGA CGACCGGGGC CGGGTGATTC AGGACGACCT GCTCACCGCT
CTCATCGCTC TCTACGTCTT CAAGACCCGG GGCGGACCCG TGATTGTGCC GGTAACCGCC
CCCCGGGTGA TCGATGCGCT GGCCGACAGA TACCGGAGCC GGGTGGTCCG GACAAAGACC
GCGCCCCAGG AGTACGTGCA GGAGGTGCTG CGCCGGGACA TCACTCAGTT CTTTCTCCAC
TTCGACGCCT TGTCCGCCCT GGTACGTATT CTCAACCTGG TGGCCGAGCG GGGGACGACC
CTGTCCAGAC TGGTGGACGA GATTCCGGAT TTCTACCTGA CCAAGAGGGA GATCCCGGTC
TCCTGGCAGG CCAAAGGGCG CGTGATCCGC AAACTCATCG AAGAGGAGGA CAAGGGGGAG
CTGGAACTCC TGGACGGGGT GAAGGTGTTC CACCGGGAAG GATGGGCTCT GGTGCTCCCC
GACCCCGAAA AACCGGTGTG CCGGGTGTAC AGTGAGGCCG CCTCCATGGA GGTCGCCGAG
GAACTCACGA ACATGTACGT GGACAAAATC AATCAAATCC TGGCGGCCCC GGAGTAG
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| Protein sequence | MKAIIMAGGE GSRLRPLTCN RPKPMVPVLN RPVMSYCIDL LKKHGITEIG VTLQYLPEAI
KEHFGDGSEY GVRLHYFVEN TPLGTAGSVK NAGEFLDRTF LVISGDALTD LDLSKAIEIH
RSQGAAGTLV LTRVECPLEY GVVITGGGGR IIRFLEKPGW GEVFSDTVNT GIYVLEPDVL
NYFTAGQEFD FSKDLFPLLM RENRPLFGVV LSGYWCDIGN LQQYLQAQYD GLAGKVRLEI
PGREIEPGVW VGEQVALDSG VTVKGPVLIG NHSHIGSGAT LEPFTVVGDG CFIQPGASVK
RSILWERVFV GRNAALRGAV LCSRVQVQAD AGVYEGAVVG DGSVIKEGGT IKPEVKVWPH
KLVESGATVS ESLIWGTRLS KSVFGAQGIS GLVNVEITPE FAGRVAAAYG STLNGGRVAV
SCDAFPPSAM LKQAVVAGLQ STGARVSILG RGILPMHRFG VRALECAGGM HVQLSTRKPD
VVTLVFTNSN GANISRAQER KIENLLARED FVRTKPGRIC DPEYAPAMPE AYLQSLLREA
DRQALRNAGF SLLLAYDEAS LSAYVPPLAR ELGLTVENVN GIQDTARARS WSEYQEILPL
LAAAVTKQKA GGGAVLDANG EYLILIDDRG RVIQDDLLTA LIALYVFKTR GGPVIVPVTA
PRVIDALADR YRSRVVRTKT APQEYVQEVL RRDITQFFLH FDALSALVRI LNLVAERGTT
LSRLVDEIPD FYLTKREIPV SWQAKGRVIR KLIEEEDKGE LELLDGVKVF HREGWALVLP
DPEKPVCRVY SEAASMEVAE ELTNMYVDKI NQILAAPE
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