| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0958 |
|---|
| Symbol | |
|---|
| ID | 6027331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1016924 |
|---|
| End bp | 1018660 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641593771 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001717103 |
|---|
| Protein GI | 169831121 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5421] Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAAGTT GGGTATTGTC GAATCACTGG TACACGTGCT ACAATATAGA TATGTATATC
CGCACTACCG TCCGCAAGAA CAAAAACGGA ACCCAAACCT GCTACGTGCA ACTGGCCCAC
AATACTTGGA ACCCTGAAAC ACGTCGTTCC GAGGTCCAGG TGCTCTACAA CTTCGGCCGT
GCAGAAAACG TGGACCGCGC GGGCCTGGAG CGCCTGGCCC GGAGTATTTG CCGCTACCTG
GGGCCGGATG AGTTGCTGCG CTTTGAAGCC CGCCGCGACT ACGGTACGGA ATTCGGGTTT
GAAAGTTCCA AGCCCTTCGG TGGCGCCTGG GTACTGCAAG GATTATGGAA ACACCTGGGT
GTGGACCGGA TTCTTACGCA ACTGCTCAAA GAACGCAAGT TCCAGAGCCC GGTGGAACGG
ACCATTTTCG CCCTGGTGGC CAACCGGGCC CTGGCTCCCA TGAGCAAGCG CGCCGTGGAA
GAGTGGGTGG CCCAGGACGT ATACATCCCG GACTTGCCGG AGATCCCGCT CCACCACCTC
TACCGGGCCT TGGACTTCTT GCTGGAGGCC GAGGAATCCT TGCAGTACCA AGTCTTTTGT
CAAGTCAGCC ATCTCTTTAA TCTGGAGGTG GACCTTTTGT ACTTTGACAC CACCTCCACT
TACTTCGAGA TCGAAACCGA AGATGACGAG GGTTTAAGGC GTAAGGGTCA CTCCAAGGAC
TCCCGGCCGG ATCTGCCCCA AGCGGTGATC GGTCTCGCGG TGACCAGGGA CGGTATCCCG
GTACGCTGCT GGGTATGGCC GGGCAACACC GCCGATATGT CCGTGGTCCA GGAGGTCAAA
AAAGACCTCG TGGGCTGGAA GCTTGGCCGG GTGATCACCG TCCTGGACCG CGGCATGGCT
TCCGAGGAGA ACCTGCGCTA TCTGCAAAGG GCCGGCGGCC ACTACATTGC CGGCGAGCGC
ATGCGGGCCG GCAAGAACAC GGTGGAAAAG GCGCTTTCCC ACCCGGGCCG CTTCAAGACC
GTGCGCGACA ACCTGGAGGT CAAGGAGATC GTCATCGGCG ACGGCGAGGC CCGCACCCGC
TACGTCCTGG TCCGCAACCC CGAGGAGGCC GAGTGGGACA AGGCCAAGCG CGAAGAGACC
CTGGACAAAC TCAAGCTTGA GTTGGCCCGT ATCGGCGAAC TAAACGGTGC GCCCCACACC
AAGGCGGTCT GCAGTATCAT CGCTCACCCC ACCTACGGCC GCTACCTCAA GACCGACAAG
CGCGGCCAAC CCCGGATCGA CAAGGACAAG ATCAAGGCCG AGGAACGCCT GGACGGCAAG
TACCTCCTGC GTACTTCAGA TGACACCCTC GCCCCGGAGG ACGTGGCCCT CGGCTACAAG
CAGTTGCTGC AGGTGGAGGA TGCCTTCCGC ACCCTGAAGA GCACCCTGGA GCTGCGGCCC
GACCACCCTT CGGGTGGTAC CCGCCACCGG CTGGAGGACC GCATCCGTGC CCACGTGCTG
CTCTGCTGGT TGGCCCTGCT CCTGGTCCGG ATAGCGGAGA ACCAAACTGG ACAGACCTGG
CGCACCATCC GTGCACACCT GCAGCGAATG CACGTGGGTG AGTTCCAGTT CCCCACGGCA
CGTGTGCATC AGCGCACTGA AACAGAACCT GATCAACACC AATTGTTCAA AGCCCTGAAA
ATCCCCCAAC CCCCGAAAAT ACTGAACATC ACTACTTCTG ACTGCCGGAT AACCTAG
|
|---|
| Protein sequence | MISWVLSNHW YTCYNIDMYI RTTVRKNKNG TQTCYVQLAH NTWNPETRRS EVQVLYNFGR
AENVDRAGLE RLARSICRYL GPDELLRFEA RRDYGTEFGF ESSKPFGGAW VLQGLWKHLG
VDRILTQLLK ERKFQSPVER TIFALVANRA LAPMSKRAVE EWVAQDVYIP DLPEIPLHHL
YRALDFLLEA EESLQYQVFC QVSHLFNLEV DLLYFDTTST YFEIETEDDE GLRRKGHSKD
SRPDLPQAVI GLAVTRDGIP VRCWVWPGNT ADMSVVQEVK KDLVGWKLGR VITVLDRGMA
SEENLRYLQR AGGHYIAGER MRAGKNTVEK ALSHPGRFKT VRDNLEVKEI VIGDGEARTR
YVLVRNPEEA EWDKAKREET LDKLKLELAR IGELNGAPHT KAVCSIIAHP TYGRYLKTDK
RGQPRIDKDK IKAEERLDGK YLLRTSDDTL APEDVALGYK QLLQVEDAFR TLKSTLELRP
DHPSGGTRHR LEDRIRAHVL LCWLALLLVR IAENQTGQTW RTIRAHLQRM HVGEFQFPTA
RVHQRTETEP DQHQLFKALK IPQPPKILNI TTSDCRIT
|
|---|
| |