Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0953 |
Symbol | |
ID | 6027143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 1012231 |
End bp | 1013268 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641593766 |
Product | type IV pilus assembly protein PilM |
Protein accession | YP_001717098 |
Protein GI | 169831116 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTAT TAGGTTCAGG TGGAGCCGTC GGCCTGGAAC TGGACACGGT TGAAGCTCGG GCGGTGGAAC TGCGGGGCAA GGCCGGTGCG GCCGGCGCGG CCACCTTGAC GGCTTGGGGC CGGGTGAGTC TCCCCCCGGG CGCCGTTGTC GACGGGATGG TGTCCCAACC GGAGCTGGTG GGGAAGGCCC TAGCCGAACT GTGGTCCGCC GGCCGGATCA CCAGCCGCGA GGTAGTACTC GGCGTGGTAA ACCGGGAAGT CCTGGTGCGC TTCGCCGTCG TGCCGGTGAT GCCCCGGACC AAGCTTTTTG GTGTCATCCG CCATCACGCC CGGGATCTCC TGCCGATTCC CCTGGACACG GCGGTCTGGG ACTATACGGT GATCGGTGAG CGGCCGGGCT TGGAGAGCCG GATGTTCGAA CTGCTGCTCG TGGCCGCGCG GCGGGAAATG CTGGACGGCT TTTTGCTGGC GCTGGCCTTC GCCCGTCTGG AGCCGCGGGA CATCGACGTG GCCTCCCTGG CTCTGCTGCG GGTCATGCCG CCGTCCCCGG CGGACGGCGC GGTCGTGCTG GTGGACCTGG GCAACGGATC AAGCACTGTT CTGGTCATCG CACGGGGCAT GCTGCGGTTG GCCCGCTTTG TTTCGGTCAG CCTGGAGGCG GCCGCCGGCA TGCTGGGATG TTCCGTAGAG GAGGCCTTGG CCGGGCCGGG CGGTACCGCG CACAGGCAAT GGCCGGCCGA GACCCTGGCC GCCTGGGCTG GCGGCGTGGA GGCCGAGATC CGCGCCTCCG TGGACTATTA CCAGCGGCAG GAGCCGGAGC CGGAGGCCGT ATCGGAAGTC GTCCTCAGCG GCCGGGGAGT CCGGGTACCG GGCCTGACCA CCCAACTGGA GGGCAATCTG GGAGTGCCGG TCAGGATCAT CGAGCCCCTG CAGGGGATTA CCTTGCCGGC GGGAATAGCC GAGAACAGCT CCTGGTCGGC TCCCGATTTC GCGACCTGTA TCGGGCTGGC GCGACGCGGA TTGGAGGGGG GACGTTGA
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Protein sequence | MGLLGSGGAV GLELDTVEAR AVELRGKAGA AGAATLTAWG RVSLPPGAVV DGMVSQPELV GKALAELWSA GRITSREVVL GVVNREVLVR FAVVPVMPRT KLFGVIRHHA RDLLPIPLDT AVWDYTVIGE RPGLESRMFE LLLVAARREM LDGFLLALAF ARLEPRDIDV ASLALLRVMP PSPADGAVVL VDLGNGSSTV LVIARGMLRL ARFVSVSLEA AAGMLGCSVE EALAGPGGTA HRQWPAETLA AWAGGVEAEI RASVDYYQRQ EPEPEAVSEV VLSGRGVRVP GLTTQLEGNL GVPVRIIEPL QGITLPAGIA ENSSWSAPDF ATCIGLARRG LEGGR
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