Gene Daud_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0946 
Symbol 
ID6027109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1003651 
End bp1004535 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID641593758 
Productdihydrodipicolinate synthase 
Protein accessionYP_001717091 
Protein GI169831109 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase
[TIGR00683] N-acetylneuraminate lyase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGTGG ATTTCGGGCG GGTGCTCACG GCGATGGTTT CGCCGTTTGA CAAGAACATG 
GAGCTGAACC TGCCAATGGC CCGGAAACTG GCCCGGCACC TGGTGGATTC GGGCTCGGAC
GGGCTGGTGG TGTGCGGTAC CACCGGGGAA TCGCCGACCC TGTCGAAAGA GGAAAAGCTC
GAACTTTTCC GGACGGTGGT CGACGAGGTG GGGGGCCGGG CCGTCGTGGT GGCCGGCACC
GGGAGCTACT CGACTAAAGA CAGCATCGCG CTGACCCAGG CGGCCGAGAA ACTGGGCGTG
GATGCGGTGA TGCTGGTCTG CCCCTACTAC AACAAGCCCT CGCAGGATGG GCTTTACCAG
CACTTCCGGG CGGTGGCCGA AAGCACCAAC CTGCCGGTGA TGATCTACAA CATACCCGGG
CGGACGTCGA TCAACCTGTT GCCCCAGACC TGTGCCCGGC TGGCCGAGAT CGGGAACATC
GTCGCCATCA AAGAGGCCAG CGGCAATATG GACCAGGCCA CCGAGCTTCG CCGGCTGCTG
CCGGACCATT TCCACATTTA CAGCGGGGAT GATTCGATGA CGCTGCCCCT GCTCGCTGTC
GGGGGCAAGG GTGTGGTGAG TGTGGCCGCG CACCTGGTGG GGGGCAAGAT CCAGGAGATG
ATCAACGCCT TCACGTCCGG GAACATCACC CTGGCCGCAA AACTGCACAG CAGCCTGTTC
CCGCTGATCA AGGGGCTTTT TATGACCACC AACCCGGTGC CGGTGAAGGC GGCGCTCGGA
ATGTTAGGAC TGAACGTGGG CCCACCGCGG CTGCCCCTGG TCGAAGCGAC GGAGCAGGAG
AAAGAAAAGC TGCGCGTCCT GCTCAGGGAG GCTCAGCTGC TGTAG
 
Protein sequence
MTVDFGRVLT AMVSPFDKNM ELNLPMARKL ARHLVDSGSD GLVVCGTTGE SPTLSKEEKL 
ELFRTVVDEV GGRAVVVAGT GSYSTKDSIA LTQAAEKLGV DAVMLVCPYY NKPSQDGLYQ
HFRAVAESTN LPVMIYNIPG RTSINLLPQT CARLAEIGNI VAIKEASGNM DQATELRRLL
PDHFHIYSGD DSMTLPLLAV GGKGVVSVAA HLVGGKIQEM INAFTSGNIT LAAKLHSSLF
PLIKGLFMTT NPVPVKAALG MLGLNVGPPR LPLVEATEQE KEKLRVLLRE AQLL