Gene Daud_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0729 
Symbol 
ID6027270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp762514 
End bp763794 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content54% 
IMG OID641593554 
Productcopper amine oxidase domain-containing protein 
Protein accessionYP_001716891 
Protein GI169830909 
COG category[R] General function prediction only 
COG ID[COG3858] Predicted glycosyl hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGC GGTCAATATT TGTAACAGCA ACAACGCTTT TACTCACTGT TACTGTTTTG 
TTTGCCGCTC CGCCATACCG GCAGGCAGGA GCCGGTTCCC CAGAGATTAT CGTTTTGCTG
GACGGCCTGC CTGTCCACTT TGACGTGCCC CCGCAAATTA TCAACGGACG GACGCTGGTT
CCTTTTCGCT TAATCGCGGA GGCTCTAAAC ATAAGCGTAA GCTGGGACGG CACTACTCGC
ACCGTGTCCG CGAGCGAGGG CGGAAAACAG GTTATATTGC AAATTGACAA CAATACCGGC
ATAGTTAACG GCTCAGCGAT TATCCTTGAT ACTGCCCCTG TCATTATAGA CAGTCGGACC
CTGATCCCGC TGCGGTTTTT TAGCGAAACT TTTGGCTGCC GGGTGGAGTG GGCCGGAGAA
ACCCGCACCA TCAAAATCGC TTCTCCGCCC TGTTCCATGA ATGTTATTGG CTTTTACGCC
CTGGGGGATG CTAGAACCAG CAGCTGGACC AACCTTTTTG GCGTGCCCTT TCCAGCCACT
GGTATTGGCA ACACGGACAT AGTAAGAGAG CTGGCCCTGG GCTGGTATAC AATCGATGCT
GAAGGCAACC TTTTGACTCG CAGCCCGCGG ACAGCCTGGC AGCGGCCTGC CGGCTGGGAA
ACGGTGCTTG CGACAGCCAG GGAGTTCGGG TTCAGAACGG AAATGGTCAT CCATGAAACT
AACCGTGGCG GGCTGCTCAC CGCTTTTCTT AACGATGAAC AGGCCATGTC GCGTGCTGTC
GACGCAATTG TACAAGAAGC AAGCCTCTTT GACGGCGTAA ATTTGAACCT GGAGGAACTT
GGGCCTTACG CGACCGGCGA AACCCAGCAA AAAATTCGCG ATAGTTTTAC CAACTTTGTT
GCTTTGTTGT CTCCGCCGCT GCGGGAGGCT AGCAAGACCA TAACACTTAC CATCCACCCC
CCAAACAGCT CCTTCCGTGG ATATGACTAT CAGGCCCTCA GCCAATTGGC TGACCGCATT
ATTGTCATGG CACATGATTA CGGCCCAAAG CCCGAACCGC TTAACCGGGT GGTGCAGGCT
GTGGAAATGG CGTTAACCGT TGTTCCCCGG GAAAAGCTCG TCCTGGCCAT TTCCGCTCCG
AGCGAAACAG CGGAGAGCAT TACTGCCAAG GTCGGGATTG CTAAGCGCTA CCGCTTGCAG
GGCGTCTCGC TCTGGCGGCT GGGTCTGGTA ACTGAAGGAA TGTGGGCATC CCTAAGGCAA
ACGATTAAAA CAAGGAGGTA A
 
Protein sequence
MMKRSIFVTA TTLLLTVTVL FAAPPYRQAG AGSPEIIVLL DGLPVHFDVP PQIINGRTLV 
PFRLIAEALN ISVSWDGTTR TVSASEGGKQ VILQIDNNTG IVNGSAIILD TAPVIIDSRT
LIPLRFFSET FGCRVEWAGE TRTIKIASPP CSMNVIGFYA LGDARTSSWT NLFGVPFPAT
GIGNTDIVRE LALGWYTIDA EGNLLTRSPR TAWQRPAGWE TVLATAREFG FRTEMVIHET
NRGGLLTAFL NDEQAMSRAV DAIVQEASLF DGVNLNLEEL GPYATGETQQ KIRDSFTNFV
ALLSPPLREA SKTITLTIHP PNSSFRGYDY QALSQLADRI IVMAHDYGPK PEPLNRVVQA
VEMALTVVPR EKLVLAISAP SETAESITAK VGIAKRYRLQ GVSLWRLGLV TEGMWASLRQ
TIKTRR