| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0676 |
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| Symbol | |
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| ID | 6027244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 709850 |
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| End bp | 711862 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641593505 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001716842 |
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| Protein GI | 169830860 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.701662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGTGG TTCTCCTCGT TTCCAAAAAC AATGGTAGCC TCGGGGCGAT CAGGAGCCTT
ATCCCGGAGC GGTATTCCCT GATGGAGACC GACATGGGGG CCGAGGGGCT GCACCTGCTA
CGCAACATCG TCACGGGGGT GGTTCTGGTG GATGCCGCCG TCCCCAGCGC TTTGCCCTGG
ATTGAGGAAG CAGAGCGGCT GAGGCCGGAT CTCACCTACA TCGGTGTCAC CGACAGCCCC
AATCCCGACC GGACCCTGTT GCAGTGCTTC TATGATCTTC TTCACCCTCC TTTCACGTCG
GTCCGGCTGG ACCGCGCTCT GGCCCGGGCC TGGGAAAGAA CAGAACTCGC TTTCGTGGTG
CGAAACCTAA AAAAACCGGC CGACCGTGCG GAATACCCCG CTCAGGTCAG GTCCGCAGTC
CCAAACAGGC AGAGGGAACG CGTACTGTGT GAACTATCCA AGGTGCTGAA CAACAACCTG
AACCAGGACC GTCTGCTGGA GCTTTTTCTG GACGCCGTTA CGGGACTGGC TCCCGTGGGC
AAAATGTCCG TCCTGCTGCT GGACGAGAGC GGCGGAGAGT ACCGAGTCCG CAAACAGAGG
GGTCTGGCCC CCGAATTCTG CTCCAGACTG CGGTTCGATT CTTCCCGGGG GCTGATTGCC
TGGCTGGCCG TTGAGGGACG CCTCCTCCGC GTTGAAGAAA CCACCGGCGG CAATTTGCAG
TCTACTTCCG AAGCCCTACA GGAGATGCGG CTTTTGCAGG CCGTGGTGAG TGTACCGCTG
ACGGCCCACG GACGGCTGAT CGGTGCCTTG AACCTGGGGC CCAAGATAAC CGGTTCTGAA
TACCACGATG AAGAACTGGA GACCTTCTAC ATTCTTTGCG GAAATGTGGC GATGGCTTTA
CAGGATATCG AGCTGCACCG GCGGCTGCAG TACCAGAAGT CTTATATTGA GAGCATTCTC
CAGCGCATGA ACAGCGGGGT TGTAGCCATA AACCGCGACG AACGGGTGAT CACCTTTAAC
AGCCGTGCCC GGACCATACT GGGATTGGAT TCGGAACAGG TCCTGGGTCA GGATTTGCGC
TGCCTGCCGA GTCCGCTGGG CGATCTGCTC TATGACACCC TGACGACGGC CCGGGCCTGC
GACAGAGAAG AGGTTCAACT GGCGCGCGGG CGCATTCCGC TGGAGGTCAG CACTTATCAA
CTGGTGAACG GACCGGATGT CTTGGGCAGC GTTATGATCT TCGACGACAT CTCCGAGCGA
AAACAGCTTG AAGCGGAGCG GCGCCAGGCG GACCAGCTTG ACGTGCTCAA CAAGTTCGTC
GGCCAGCTGG CGCACGAGAT AAAAAACCCG ATGGTGGCCA TTCAAACCTT TTCTGAGCTG
TTGCCCGAAA AATACGACGA TAGTGCCTTT AGAGACTTCT TCACCCAGAC GGTCCGGCAG
GAGGTAAAGA GGCTGAATGA GCTGGTAGAG CAGCTCATCG CCTTTTCGGC ACCTTTGTCC
TACAAGTTCG TGGTTGGTGA GATCCACGAA ATCCTGCGGT TGGGAATTTT ACTGTTGAGG
GAACAGGGCA AGGGTGCCAA CATTAATGTA GAGGCCTCTT ATTGCGGGGA GTTGTTGTAC
GTGCGGGCGG ACCGAACCCT GTTGGCGAGG GCGTTTTCAT ATCTTCTGAA ATCATTTAAC
TCCACGGAAC GGGGGGGGAG CCTGCATATT CAGACGGCGC AAGACAAGTC CCTTTTCAGT
TGCGGGGGGC TTTCCATTTC CTTCTGGGAT TCGGTGACCA CGGTCGGGAG TCAAGATGTG
GAGACTATGT TTGACCCGCT CCACGCCATG CAGAACAGCC ACATTTCTCT CGAACTTCCG
GTCAGCCGCA AAATCATCGA GGATCACGGA GGCCGGATCA AGGCGTCTTT GGTCAAGGGT
AAAGGCCTTA AGTTCACAGT ATATCTGCCC ATTTTTTTCT GTGAAGGCGG TGAGGGTCTT
GGCAAAGCCA TCCCGGATAC TGGTAGTGGA TGA
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| Protein sequence | MKVVLLVSKN NGSLGAIRSL IPERYSLMET DMGAEGLHLL RNIVTGVVLV DAAVPSALPW
IEEAERLRPD LTYIGVTDSP NPDRTLLQCF YDLLHPPFTS VRLDRALARA WERTELAFVV
RNLKKPADRA EYPAQVRSAV PNRQRERVLC ELSKVLNNNL NQDRLLELFL DAVTGLAPVG
KMSVLLLDES GGEYRVRKQR GLAPEFCSRL RFDSSRGLIA WLAVEGRLLR VEETTGGNLQ
STSEALQEMR LLQAVVSVPL TAHGRLIGAL NLGPKITGSE YHDEELETFY ILCGNVAMAL
QDIELHRRLQ YQKSYIESIL QRMNSGVVAI NRDERVITFN SRARTILGLD SEQVLGQDLR
CLPSPLGDLL YDTLTTARAC DREEVQLARG RIPLEVSTYQ LVNGPDVLGS VMIFDDISER
KQLEAERRQA DQLDVLNKFV GQLAHEIKNP MVAIQTFSEL LPEKYDDSAF RDFFTQTVRQ
EVKRLNELVE QLIAFSAPLS YKFVVGEIHE ILRLGILLLR EQGKGANINV EASYCGELLY
VRADRTLLAR AFSYLLKSFN STERGGSLHI QTAQDKSLFS CGGLSISFWD SVTTVGSQDV
ETMFDPLHAM QNSHISLELP VSRKIIEDHG GRIKASLVKG KGLKFTVYLP IFFCEGGEGL
GKAIPDTGSG
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