Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0623 |
Symbol | |
ID | 6027072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 662307 |
End bp | 663425 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641593452 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_001716789 |
Protein GI | 169830807 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000156623 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACCAAG AATACATGCG GATGGCTCTG GACCTTGCTG TCAGGGCGCG GGGTCGCACC AGTCCGAATC CCCTGGTTGG TGCGGTGGTG GTCCGGGACG GTGAGATTGT GGGCCGTGGG TATCACGCTC GGGCCGGTCT GCCCCATGCC GAGATTGTGG CGCTTGCCCA AGCCGGTGAG GCGGCGCGTG GGTCCACCCT CTATGTTTCT TTGGAGCCGT GCTGCCACTT CGGCCGGACC GGTCCCTGCA CCGAGGCGGT GATTGCGGCC GGCGTGCGGC GGGTTGTGAC GGCGATGCGG GATCCCAATC CCAAGGTTGC CGGTAGGGGT ATTGCGCGGC TGCGCGAAGC AGGCGTTGAG GTCACCGAGG ACGTCCTCCG CGATGAGGCA GCCCGGTTGA ATGAGATATT CATTAAGTAC ATCACCACCG GCAGGCCGTT TGTGGCCTTA AAGGTGGCCG TGAGCCTGGA TGGCAAGATC GCCACACGCA CCGGCGATTC GCGCTGGATT ACCGGTGGGC CGGCCCGGGA ATACGCCCAC CGGCTGCGGG ATACGTACGA CGCGCTTCTG GTGGGGCGGG GAACCGTGGT CAAAGACGAC CCGTCTTTGA CCACCAGGCT TCCCGGAGGG GGCCGGGATC CGGTGCGGAT TGTGTTGGAC AGCCTGGCTC GCATCCCGGA ATCGTCCCGG GTACTGTCGG GGGAATCGAC CGCCCCGGTC ATCGTGGCGG TGACCGGGCA GGCTCCCCGG ACTCGGGTGG CCGGCCTGGA GAGCCGGGGC GTCCAGGTGG TGCGCTGTGG GCCGGGACCG GCGGTCGATC TGGAGGTGCT GCTCCGGGAA CTGGCCGCCC GGGAGATCAC CAGCGTGATG GTGGAAGGCG GGGCGACGGT GCACGCTTCG TTTCTGGAGG CCCGGTTCGT TGATAAGCTG CACTGGTTTG TGGCCCCGAA GATCGTGGGC GGGGTGGAAG CTCCGGGGGC GGTCGCCGGC CGGGGTGTGG GGCGCATATC CGAGGCGGTC GGCCTGGAAC GGGTGCGCCG GATCGAATTG GGGAACGATT TGTGTATCGA GGGCTATCCG GTGTGGGGGG GGGCGGCGGA TGTTCACCGG GATTATTGA
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Protein sequence | MDQEYMRMAL DLAVRARGRT SPNPLVGAVV VRDGEIVGRG YHARAGLPHA EIVALAQAGE AARGSTLYVS LEPCCHFGRT GPCTEAVIAA GVRRVVTAMR DPNPKVAGRG IARLREAGVE VTEDVLRDEA ARLNEIFIKY ITTGRPFVAL KVAVSLDGKI ATRTGDSRWI TGGPAREYAH RLRDTYDALL VGRGTVVKDD PSLTTRLPGG GRDPVRIVLD SLARIPESSR VLSGESTAPV IVAVTGQAPR TRVAGLESRG VQVVRCGPGP AVDLEVLLRE LAAREITSVM VEGGATVHAS FLEARFVDKL HWFVAPKIVG GVEAPGAVAG RGVGRISEAV GLERVRRIEL GNDLCIEGYP VWGGAADVHR DY
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