Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0602 |
Symbol | |
ID | 6025542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 640323 |
End bp | 641276 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641593431 |
Product | phage integrase family protein |
Protein accession | YP_001716768 |
Protein GI | 169830786 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00243284 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTACCATT TGATTGACGG TTTCCTAGCC TACTTGCAGG CTGAGCGTCA AGCCTCGCCC CGGACGATCA CCGCCTACCA GAAGGATCTT TTCGCCGGGC TCGATTACTT TGCGCGCCGC CGGGGAAAAG CGGATGCCGA ACTCCGGGCG GGCGACATCG ACCTGAAATT GTTCCGGGGG TACCTGGCGC ACCTCGGGCA ATCCGGCCTC GCCCGGAGCA CCATCGCCCG GAAGGTGGCG GCCTGGCGCT CGTTTTTCCG CTACCTGGTC CGGGAAAACG CTGTGCCGGC GAGTCCTTTG GCCGGGATGT CCGCGCCCCG GCTGAAGAAA CGGCTGCCGG GCGTACTGTA CCCGGAAGAG GTCGGCACGC TGCTCGAGGC GCCGGACTTA AGCCCCACCG GGTTGCGGGA CCGGGCACTC CTGGAGATGT TGTATGCCGG GGGCTTGAGG GTGTCGGAAC TGGTGGGGCT GGACCTGGCC GACCTGGAAC TGAAACAGGC GTACGTCCGA GTGCTGGGGA AAGGGAACCG GGAAAGGCTC TTACCCCTGG GGGGATACGC TGTGGAGGCC CTCAAGCGGT ACCTAGCCGA GGGGCGGCCG AAGCTTCTTG GCGGGAAAAA GACCACCGCA GCGCTCTTTC TGAACTACCG GGGCGAAAGG CTGACCGACC GGGGCGTGCG GCTTGTTTTC ACCAACTACC TGAAGGGTTT GGCGTCCGGG GTACCCGGGG GTACCCGCTT TAGCGGGTCA GCGGATCGGC AGGCCGGCCC CCACCTGCTC CGGCACTGCT TTGCGACCCA CCTTCTGGAG GCAGGCGCGG ATTTGCGCAC GGTCCAGGAA CTCCTGGGCC ACGCCCGCCT GTCGACCACC CAGATTTACA CCCGGGTTTC GGCCGACCGC CTGCTGGAGG TGTACCGGCG GGCGCACCCC CGCGGCCGGA GCCGCAAGGA CTAA
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Protein sequence | MYHLIDGFLA YLQAERQASP RTITAYQKDL FAGLDYFARR RGKADAELRA GDIDLKLFRG YLAHLGQSGL ARSTIARKVA AWRSFFRYLV RENAVPASPL AGMSAPRLKK RLPGVLYPEE VGTLLEAPDL SPTGLRDRAL LEMLYAGGLR VSELVGLDLA DLELKQAYVR VLGKGNRERL LPLGGYAVEA LKRYLAEGRP KLLGGKKTTA ALFLNYRGER LTDRGVRLVF TNYLKGLASG VPGGTRFSGS ADRQAGPHLL RHCFATHLLE AGADLRTVQE LLGHARLSTT QIYTRVSADR LLEVYRRAHP RGRSRKD
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