Gene Daud_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0594 
Symbol 
ID6026139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp630767 
End bp631618 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content63% 
IMG OID641593423 
ProductKu domain-containing protein 
Protein accessionYP_001716760 
Protein GI169830778 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCCCGA TCTGGAAAGG GGCCGTGACC TTCGGCCTGG TGTACATTCC GGTGAAACTC 
TATCCGGCGA CCGAGCGCCG GGACATTAAA TTCAATTACC TCCACGAGCG GTGCCACACA
CCGATCCGGT ACCGCAAGTT CTGCCCCCAT TGTGAGGCGG AAGTGCCTGC CCAGGAGATC
GTCCGGGGCT ACGAGTACGA AAAGGGCCGG TACGTGGTCC TGACGGAAGA GGAACTGGAG
AACCTGCCCA CGGGCGGAGC CGGAAACATT TCCCTCCTGG ATTTCGTCCC CATCGAGGAG
ATCGATCCGG TCTACTACGA TCGGTCCTAC TATCTCTCAC CGGCGGAAGG CGGCGAAAAG
GTGTACAGCC TGCTGCGCGA AGCACTGGAG AAGAGCGGAC GGGTCGGTGT GGCCCGGGTG
TCCATCCGGA CCAAGGAGTC GCTGGCGGTG CTTCGGGTCA GCGGCCCGGC GCTTCAGATG
AGCACCATGT ACTATCCGGA CGAGGTGCGT TCCCCCGCGC TCCTGCCGGA ACTGGGGGCC
GGGGTGAACC TGCACGCCAA CGAGGTCAAA ATGGCGCTGA ACCTGGTGGA AAGCCTAGCG
GGAACTTTTG AGCCCGAAAA ATACCGGGAT GAAAGGCGGG AGGCCGTTTC CGAAATCATC
CGGGCCAAGG TGGCCGGTGA GACCGTTGTG ACGGCGCCGC CGGCGCGCCC GGAAAAGGTG
GTCGACCTGA TGGAGGCTCT GAAAGCGAGC ATCGAACAGG CCAGGAAGGA GCGTGGGACG
AAGAAAGCCG AAGGCAAGCG GACGAGAACA AAGAGGCCGC GCCCACCCGC TGGTGACGCG
GCACACCCGT AG
 
Protein sequence
MRPIWKGAVT FGLVYIPVKL YPATERRDIK FNYLHERCHT PIRYRKFCPH CEAEVPAQEI 
VRGYEYEKGR YVVLTEEELE NLPTGGAGNI SLLDFVPIEE IDPVYYDRSY YLSPAEGGEK
VYSLLREALE KSGRVGVARV SIRTKESLAV LRVSGPALQM STMYYPDEVR SPALLPELGA
GVNLHANEVK MALNLVESLA GTFEPEKYRD ERREAVSEII RAKVAGETVV TAPPARPEKV
VDLMEALKAS IEQARKERGT KKAEGKRTRT KRPRPPAGDA AHP