Gene Daud_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0524 
Symbol 
ID6027438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp561946 
End bp562494 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID641593361 
Productphosphodiesterase 
Protein accessionYP_001716698 
Protein GI169830716 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0250808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTGG GACTGGTGAG CGATACCCAC GGCGAGTTGG AAAACCTGCG GGAGGCTGCG 
AATCGGCTGC GGGATGAATG GCGGGTGGAC GCGGTTGCAC ATCTGGGGGA TGACTGCGAG 
GACGCGGAGG TGCTAAGGGA GTATTCTTCA TGGAAGGTGC TCCAAGTGCC GGGAGTCTTT 
TGCGAGCACT ATCGCGACCC GACCGTAACC AACCGGGTGG TGGAAGGGTT TGCCGGTTGG 
CATGTGCTCC TTTCCCATAC CCGAAAGCCG CACCAGAATG ACTTGCCTGG AGATCCGGAC 
CCGGAGGCGA TGGGGGCCCG GCGGGAAGTG GACGTGGTGG CCTACGGACA TTCCCATATT 
CCGGAGATTG ACATCGCGGC GAACGGGGTG CTCTGGATCA ACCCAGGCCA TCTGAAAAGC 
CAGGATAAGA AAGGCCACGC GCCGAGTTTC GCTGTTCTGG AGTTTGGGCC GGAAGTCGTA 
GTGGCCCGGT TGGTGGATTT ACAATCCGGT GTTGTGATCG AGACCCGGCA AGTAGCGAGA 
AAGGATTAG
 
Protein sequence
MRLGLVSDTH GELENLREAA NRLRDEWRVD AVAHLGDDCE DAEVLREYSS WKVLQVPGVF 
CEHYRDPTVT NRVVEGFAGW HVLLSHTRKP HQNDLPGDPD PEAMGARREV DVVAYGHSHI 
PEIDIAANGV LWINPGHLKS QDKKGHAPSF AVLEFGPEVV VARLVDLQSG VVIETRQVAR 
KD