| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0394 |
|---|
| Symbol | |
|---|
| ID | 6025703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 428080 |
|---|
| End bp | 432825 |
|---|
| Gene Length | 4746 bp |
|---|
| Protein Length | 1581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641593241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001716579 |
|---|
| Protein GI | 169830597 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCTTTC GCCACCTAAG AAACGTCCGC GGCTTCTTCT CCGACTATTA CCTGGGGAGC
GTATTTGGTC GGGGACGGGG CAGAAGGAAG CAGATTTCAG ACCGGGAGAC TGGTATTGCT
TACCGCCGCT TTTTGCGTAT TTACGAACGG GCCGAAGGAC GTGCCTTTGA CGCTTCGCTC
TGCCGGGAAC AATTCATCCG TCCACTCCTC CGTGACGTCC TCGGATTTCA TCTGGGAGCG
GGGGAAAACC GCATTCACTA TCTCTTTCGT TCGGCTGAGG ACGAGGCCAA CGATGCCAAG
CCGCTCCTGC CGGTCTATTG CGGGTCCTGG GACGAGGACC TGGACAGCGG TCGCGGTAGC
GCCGTTCCTA TGCGCCGGTT GGAAAGAGCA TTGACGGGAG CCGATCTGAG TTACGGTTTC
CTAATCACCG GAGAATGCAT CCGGTTGGTG CGCGCACCTG GCGACGGCCC GCGCGGTGCC
TATCTCGAGG TGGATCTCGC GGGGTTGGCG ACCGATGAAG ACCCGGAATC GTTTGCTGTT
TTTTACCGTC TCTTCACCTT TTCTCAATAT CAGCCCGATG ATCAGGGGCG TCTCCCCATA
CGCCAGGTCG AGGCGGAAAG CAGAGAACAT GCCGAGAAAG TCTCGGAGGA TCTTAAGCGC
ACAGTTTTCA CGGCGGCCGA GTCACTGACC GGTGGTTTGT TGCAAGATGC CGTACGGAGG
GGAAGTGTCG CCGACCCCGC CACGATTACT GAAACGGAGC GTATGGCGTA CCGCGACGCC
GCCCTAACCG CCCTTTACCG TATCCTTTTT ATCCTCTATG CCGAGGCGCG GGATCCGAGA
TTGGACGAGC ACAAGTTGTA CCGGGAGGCG TATTCGATCC TCGGACTGGT CGATGATCTC
TTGCGCGACC CCACCCGTGA CTGGCCGGAG AACAGTGCCG GCCTCTGGAT GCGCCTTAAA
GCCTTGTTCC GCATTTACGA CCAGGGCCTG CCGCGGATTA CCCCCTGGGA ACACATCCCA
CCGCGAGGCG GCGATCTTTT CAAAGCCGAC ACGCCGGATG GTCGCCTGCT TGATGCCGCG
GAACTGCCCG ACAGGATCAT TGTCCGGGTT CTCCTCGACC TTACCACCAC TGCTCCTCGC
CGCGGTATCG GGCGCGAACG GGTTTCCTTC CGTGAGCTTG ACATCGAGCA GCTGGGTGCT
GTGTACGAGG GTCTGCTGGA GTATGAGCCG CAGGTTGCTC AAAATACTAC CATCGAGGTG
CGGGTGCAGG GCAGGATTTA TGCTTTGCCG CCGGGCGAAA TCGCCCGCCT CTATGAAGAA
AAAGCCCTGA TTTTAAAGGG CGATTTTGCC GTTGTCGCCG GGACGGAGGC GGAATACCTG
CATCCCGAAG CACCCGAAGA GGATGACGGG GAAGCGGATG TTGAGGACGA ATTGGTTCAA
GACGAAGATG CGGAGAATGC GCAGACGGAC ATAGAAGGCG AGGAACCGGA GGACAAAGGA
GTCAAAAAAG GTGCCGCCGC CCGCCTTGTG CGCCGCCTGG AGCGCGGGGA TTTCCACTTC
GTCCCGGGGT CAGCGCGCAA AGGTACTGGT TCCTTTTATA CCCCGCTTCC CCTGGTGCGG
GATCTTGTCT ATCACGCGCT TGGGCCGCTG GCTGAAGGGA AGAGTCCTGC TGAAATTGAA
AGCCTGCGTG TCCTTGACCC CGCTTGCGGT AGTGCACACT TCCTGGTCGA GGCCATGCGT
TTCTTGGGCC GTGAGTTACA TCGCGCCTAT GCAGAAGGGT ACGGCGCCAA GGGTCCCCCG
CAATTCCGCA GTACCACAGG CCAACGTTGG GACAGCGACT GGCAGGTGTC GGATGAGGAA
GCGCGCGCCA CCAACTCCGA AGCCCGGGCA TGGTGCAAGC GCCGGATCGC CGAACGCTGC
CTTTTCGGCG TAGACCTAAA CCCCACCGCC GTCAATCTGG CACGGGTGGC GCTGTGGATC
GAGTCCTTGG CCGGCGACCG GCCGCTCACC TATTTTGAAC ACCATGTTCG TTGCGGCAAC
TCCCTGTTGG GCACCTGGCT CAAACGCCTC GACGACCCGC CGTTGCCGTC CATGGAGAAG
CGGCAGCCCA ATGGCCAGAT AAGCCTGTAC ACCACCTTCG CCGATCACGT ACGAAAAGTT
GTTCACGAAG CCGCGGAAAC ACGCCGGTTG ATTGACCGTG CCGCTGACGG TGGTGATGTT
GAACCGGAAA CCATTGAGGA ACAGGAATTC AAACAGTACC AACTGAGGGA GGCCGAAAGG
ATCCTTGGTG CGGCCCGGCT TCTTTTTGAT CTCCGTTCAT CTTCGGCATT CATCCCGGAG
ATCTGGGGCG AATGGACTGT ACTATGCGGG TATGTGACGA AGCCTGGGCA ACTGGAGGCC
TACGCCCGCT CCCGCCCTTG GTGGGATGCA TTCGAACAGG TCCGCCGTCG CGAGCGTTTC
CTGCACTGGG AGTTAGAGTT TCCCGAAGTT TTTCTCGATC CGGCAAGGCC GGGGTTTGAT
GTCGTGCTCG GTAATCCTCC GTGGGACAAG ATCAAACCGG ACAAGAAGGA ATTTTATGGC
AAGTACGATA TTTTCATCCG GGCGTTTGTG GGAGGCGAGT TGGACCGGCG GATCGCCGAA
CTTCACGCTG CAATTCCTGG GCTTACGGAC GAGTTCAGGG CATATGAAGA CCGTGTAAAA
ACCGTCGCTG CCTGTCTTAA GAAGGGCGGT GATTATGAAT TTCAAGACTG GAAGGTTGAC
GGCAGGAACA CGGGTGGTGA CCCGGACAAG TTTAAGTTTT TTGTTGAGCG TGCCCACCAG
GTGGTTTACG CGGGTGGCCG CGTAGGTTTA GTTGTTCCCT CGGCCATTTA CAATAACGAA
GGCTGCACTG GTTTGCGCTA TATGTTATTA GACGACTCCC AGGTCGAACG CTTTTACGCC
TTCGAGAACC GCAAAAAAAT CTTTGACATA GACTCCCGCT ATAAATTTGT TAACCTGGTC
TTTCGCAAGG GCAAGCCGGA GGCTGACGGT TTTGAGGCTG CCTTTATGCG TCATGAGTTG
GACGAATTGA TCAGCACCAA TTGGAAGCCG TGGATGGTAC CGGTCAAAAA GAGCGAACTC
AAGTACCTCT CGTCCGGCAC ACTGGCGTTC CTGGAGTACC GTAATCCACG CGACCGGGAA
ATCGTTCTCA GGATGTACGA GGGCCGCCCG CTCCTCGGCG ACCAGGGCTC CGGCACCTGG
AACGCGCGGT TCTATACAGA ATTCCATATG ACCAACGACC GGGAGCTGTG GACCGATCCG
CGTACGGGCA AACTGTGGAA CCCACGCCAG ATCCTGGGCA ATGTGCCGGG CACCACCGAC
CGGCCGCCGT ACTACGACCC CGCTGCCTGG CCCGAAATCC GGGAACGGAT GGCTGAGAAA
GGCTTCTGGC CGCTTTATGA AGGCAAACAT ATCGAACAGT TCCTGGTGGA TATCAAACCC
ATTGAGCGCT GGGTGAGGCT GGAAGCGGCG ATGAAGAAGT ACGACCAAGT GCCCGACCCG
GGCCCAAAGG TGGTCTTCCG CGACATTGCC AGTAACACCA ATGAACGAAC CTGCATCGCG
GCAGTGCTAC CGGAGAAGTC GTGTGCCGGA CACACGCTTG CACGTTTAGT CACAGATGAA
GCGCCCAACG TAGCAACTAC GGTCCTAAAC GCCATCGTAG TAGATTTCAC TATCAGACTA
CGTACTGCAG CGACTCATCT CAGCTTTACG TACATGTCTC GGGTGGCAGT TCCTCAGTCT
GCCGTTGTTC AACGTCTACC GTCAGTTGGG ACAATGAGTG CCCTTACATC CGGAGCGCAG
CATGTTTCCG ATTTAATGAC GATATGGGAT TGCGTGTGGT CTGCCAACCG CGCCGTGGCT
GAAGCTTATG GTCTGACACC GGACGACTTT GAGTACATTC TCAGCACTTT CCTCGTTTTC
GCGCGTAAGT GTCCGGAATT CTACGCCTAT TTGCGGGAAC GCGTATCCGA ATGGAAGCGA
CAGACGGTAG AAATAAAAAG GGAAGTAAGA ACTCGTGTCT TTCCAAAGCA CACGGGGGTG
ACAGAAGCAG CGGAAGCATC GGTCCCATAT GGGATCAAAG CACGTCGCTC GGCCAGCAGC
ACAAAGTCTC GCGAAGCTCC GACACAGTTC AAACAGGCCG TGATTTTCGC CTGGGTGGTA
TACCAGCTTT ATTCGCCCGG TTACCCCGTC AGCCGCTACC GCGCCGGCAA GATGATCTAC
CTCATCGAGC GGGCTGTGCA GCTTGGGCTC TTCCGGAACT ACCTGAAGCA GGCGGCCGGG
CCTTATGACC CGAATCTCCG CTATCGCGGA CCGGAGGGCA TTGCCACCCA TCAGCGACAG
TGGCTGGTTG CAGTGGATGA CACCCACTTC GAACCGGGGC CAAGGATAGA CGAGGCACTT
AATTACGCTG AACGTTATAT TCATATTTCA CGGGCACAAG CCTCAGCCGT GATCAAACAG
TTCCGAACTT ACCAGGATGA CACCCTGGGC CGCTGGACCA CCGTAGACTT AGCGGCGCGT
GAACTAATTG CTCAGGGCAG CGTTGTGACT GTTGAGAGCA TTCTTGCGCA CCTGAGCGCA
TCAGAAGAAT GGGCGCACAA GCTGGACCAG AAGGAGTTCA CGCTCGAGTT AATTACCGGA
ACACTTTCTG GTTTGCGCAA CTTCGGCTTT TTGTCCGGCG AAAGAGAGGG CAAGAACCGT
GGTTAA
|
|---|
| Protein sequence | MIFRHLRNVR GFFSDYYLGS VFGRGRGRRK QISDRETGIA YRRFLRIYER AEGRAFDASL
CREQFIRPLL RDVLGFHLGA GENRIHYLFR SAEDEANDAK PLLPVYCGSW DEDLDSGRGS
AVPMRRLERA LTGADLSYGF LITGECIRLV RAPGDGPRGA YLEVDLAGLA TDEDPESFAV
FYRLFTFSQY QPDDQGRLPI RQVEAESREH AEKVSEDLKR TVFTAAESLT GGLLQDAVRR
GSVADPATIT ETERMAYRDA ALTALYRILF ILYAEARDPR LDEHKLYREA YSILGLVDDL
LRDPTRDWPE NSAGLWMRLK ALFRIYDQGL PRITPWEHIP PRGGDLFKAD TPDGRLLDAA
ELPDRIIVRV LLDLTTTAPR RGIGRERVSF RELDIEQLGA VYEGLLEYEP QVAQNTTIEV
RVQGRIYALP PGEIARLYEE KALILKGDFA VVAGTEAEYL HPEAPEEDDG EADVEDELVQ
DEDAENAQTD IEGEEPEDKG VKKGAAARLV RRLERGDFHF VPGSARKGTG SFYTPLPLVR
DLVYHALGPL AEGKSPAEIE SLRVLDPACG SAHFLVEAMR FLGRELHRAY AEGYGAKGPP
QFRSTTGQRW DSDWQVSDEE ARATNSEARA WCKRRIAERC LFGVDLNPTA VNLARVALWI
ESLAGDRPLT YFEHHVRCGN SLLGTWLKRL DDPPLPSMEK RQPNGQISLY TTFADHVRKV
VHEAAETRRL IDRAADGGDV EPETIEEQEF KQYQLREAER ILGAARLLFD LRSSSAFIPE
IWGEWTVLCG YVTKPGQLEA YARSRPWWDA FEQVRRRERF LHWELEFPEV FLDPARPGFD
VVLGNPPWDK IKPDKKEFYG KYDIFIRAFV GGELDRRIAE LHAAIPGLTD EFRAYEDRVK
TVAACLKKGG DYEFQDWKVD GRNTGGDPDK FKFFVERAHQ VVYAGGRVGL VVPSAIYNNE
GCTGLRYMLL DDSQVERFYA FENRKKIFDI DSRYKFVNLV FRKGKPEADG FEAAFMRHEL
DELISTNWKP WMVPVKKSEL KYLSSGTLAF LEYRNPRDRE IVLRMYEGRP LLGDQGSGTW
NARFYTEFHM TNDRELWTDP RTGKLWNPRQ ILGNVPGTTD RPPYYDPAAW PEIRERMAEK
GFWPLYEGKH IEQFLVDIKP IERWVRLEAA MKKYDQVPDP GPKVVFRDIA SNTNERTCIA
AVLPEKSCAG HTLARLVTDE APNVATTVLN AIVVDFTIRL RTAATHLSFT YMSRVAVPQS
AVVQRLPSVG TMSALTSGAQ HVSDLMTIWD CVWSANRAVA EAYGLTPDDF EYILSTFLVF
ARKCPEFYAY LRERVSEWKR QTVEIKREVR TRVFPKHTGV TEAAEASVPY GIKARRSASS
TKSREAPTQF KQAVIFAWVV YQLYSPGYPV SRYRAGKMIY LIERAVQLGL FRNYLKQAAG
PYDPNLRYRG PEGIATHQRQ WLVAVDDTHF EPGPRIDEAL NYAERYIHIS RAQASAVIKQ
FRTYQDDTLG RWTTVDLAAR ELIAQGSVVT VESILAHLSA SEEWAHKLDQ KEFTLELITG
TLSGLRNFGF LSGEREGKNR G
|
|---|
| |