Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0391 |
Symbol | |
ID | 6025691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 422029 |
End bp | 423597 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641593239 |
Product | extracellular solute-binding protein |
Protein accession | YP_001716577 |
Protein GI | 169830595 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGCATA TAAAGCAAAG TATATCTATC CTGTTGATTA TTATGTTGAT TGCCGGGTTA GCCGGGTGTG GTGAGCAACA AAAAGAAGTA CAGGAAGCCA GGCAAGAGCT TGTGGTCGGG TTGGCGGCCG ACGCCAATGA ACTCAAGTTC AAAGAAGTGG GTATCGGGTC GCCGAATGCC AATATCTACG AAAGTCTCGT CAAGCTGGAC GCCGACTACC AGGTTCAACC GCTCTTAGCC ACCAGGTGGG AGTACAGAGG CGACAACACC TGGAGGTTTT ACCTAAGGGA AGGCGTCAAG TTTCATAACG GAGAAGAGTT GACGGCGGAG GCGGTCAAGC GGTCCCTGGA AGAGGAAATA CGTCCCAGCG GTAGGGCCGT CCTGAAAATC GAGAAGGGCT CCGTCAAGGT TGTCGATAAA TATACGGTCG ATATCGTCAC CACAGAGCCC AACATGCGCG TCCCGGAGAT CCTGGCGCAT CCCCTCAACG GAATCCGAGC GCCGGGTGTC GATCCTGTTG CCAATCCGAC CGGCACAGGC CCGTTCCGTT TCGTCCGCTA CGAAAAAGAT AAAGAACTCG TCGTGGAGCG CAATCCCGAC TACTGGGGTA CACCGCCCAA GCTGGATAAG GTGACTTTTA AATACATTCC CGATCACAAC ACGCGCCTGA TGGCCCTTCA AGCCGGAGAA ATAGACGTGG CGAGGGAGAT CCCCCGCGAA ATGCTCGGGC AGGTCAAGGC GATGGACGGT GTCAGATTGG CAACCGCGCC GCAGGGCCCG TATGTGGCAC TGTCCCTCAT GGTCAACGGG AAACCGCCGC ACGACATTTT GCGGGATAAG ACAGTACGGC AGGCCATCGG GTGGGCTATC GACCGCGAAG CCATTATTCA AAAGGTGTGG GAAGGCAACG CGGACGAGAG TCAAACGGTT ATTCCCGCGG GGATTCTGGG AGAGCACAAA AACCTGGTAC AAGGATTTGG CTATGACCCG GCAAAAGCCG GACAGCTGCT TGATGACGCC GGCTGGAAGC CCGGGCCCGA CGGTATCAGG ACCAAAAACG GCAGGCGGCT TGAGCTTACG CTGGTTTCCG GTTTTCCTTC GGCCAGCGTG TTGAAACCTT TGCCCGAAGT CCTGCAGCAG CAGCTTCGTG ACGTCGGCAT TGATGTCCGT ATTGTGGAGG TGGCTGATGA CGGCCTGTAC TACGGCAGGC TGGAAAAGGG TGAAGGCGAC CTCTGGTTGG AGCGGGGGAA TCAGAATAAC GGCGACCCGA CCTTCCTTCC GGAACTCCTA TACCACAGCC GGGGATACCA GGGGTCTACT TACAACAAGC CGTTCTGGCC GGGGGAAGAG TTCGACCGCC TTATTGACGA GGCCAGGAAC ACCCCGGATA TCCGCGAGGC CACCCGGCTT GTGGCGGAGG CTATGCACAT TCTGATTGAT AAGGAAAGCA CCGTCGTGCC TATTGCCGCC CTTTACAATG TCTATGCCGT AAAAGAAAAG GTCCAGGGAC TCAGCCCTCA TCCCGCGCCT ATCCACACCA GATGGGATAC CGCTTACATC AAAGGATAG
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Protein sequence | MRHIKQSISI LLIIMLIAGL AGCGEQQKEV QEARQELVVG LAADANELKF KEVGIGSPNA NIYESLVKLD ADYQVQPLLA TRWEYRGDNT WRFYLREGVK FHNGEELTAE AVKRSLEEEI RPSGRAVLKI EKGSVKVVDK YTVDIVTTEP NMRVPEILAH PLNGIRAPGV DPVANPTGTG PFRFVRYEKD KELVVERNPD YWGTPPKLDK VTFKYIPDHN TRLMALQAGE IDVAREIPRE MLGQVKAMDG VRLATAPQGP YVALSLMVNG KPPHDILRDK TVRQAIGWAI DREAIIQKVW EGNADESQTV IPAGILGEHK NLVQGFGYDP AKAGQLLDDA GWKPGPDGIR TKNGRRLELT LVSGFPSASV LKPLPEVLQQ QLRDVGIDVR IVEVADDGLY YGRLEKGEGD LWLERGNQNN GDPTFLPELL YHSRGYQGST YNKPFWPGEE FDRLIDEARN TPDIREATRL VAEAMHILID KESTVVPIAA LYNVYAVKEK VQGLSPHPAP IHTRWDTAYI KG
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