Gene Daud_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0388 
Symbol 
ID6025668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp419252 
End bp420226 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content64% 
IMG OID641593236 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001716574 
Protein GI169830592 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTTG TTCCTGTTTT AAAGGTGAAT AATTTATCCA CTCACTTTCA TACCCGGCAC 
GGTGTCATCA AGGCCGCAGA CAGAGTTAGC TTCACGGTGG CGGCCGGGAA AACCCTGGGC 
CTGGTGGGGG AGAGCGGCTG CGGCAAGAGC GTTACGGCCC TGTCCATCCT GCGCCTGATT 
GAGCCGCCGG GAAGAATTCT CTCCGGGGAA GTCTGGTTAA ACGGCTGCAA CCTGCTCAAG 
CTTCCCCCAG GGCAGTTGCG GCAGGTGCGG GGCAGGGAAA TAGCGCTGGT TTTCCAGGAC 
CCGCTGACCT CCCTGAACCC GGTTTTAACC ATCGGCACGC AGCTTGCGGA AACCATTGTC 
TCCCATGAAG AGGTATCCCG GGCGGAAGCG CGGCGGCGGG TGGCGGAGCT TCTTTTGCGC 
GTGGGCCTGC CCGACCCGGA AAGGCTCATG CGCCTGTATC CTTTTCAGCT TTCCGGGGGC 
ATGCGCCAGC GGGTGATGAT GGCCATGGCG CTCTCGCTGC GCCCGAAAGT TTTGATTGCC 
GATGAGCCCA CCACCGCCCT GGACGTTACC GTCCAGGCCC AGATCCTGGC GGAGCTGAAG 
CGGCTGCAGG AAGAGCTGGG GATGGCGATC ATCCTCATCA CCCACGACCT GGGGGTGGTC 
GCGGCCATGG CCGACGAAGT GGCGGTGATG TACGCCGGAT CGATTGTGGA GCGCGGCCCG 
GTGGCGCAAG TATTTGACCG TCCCGCCCAC CCCTACACCC GGGCTTTGCT CCGTTCCGTG 
CCGCGCCTGG GCAGGGAAGA ACTGGTGCCG GTGGTGGGAC AGCCGCCGTT GCTTCTAAAT 
CTCCCGGCCC ATTGCGCCTT CCTCCCCCGC TGCCCGCAGG CGGGCGCGGC GTGCTGGGGG 
GAGAAGCCAG AATTGCGGGA GATCGGGCCG GGCCACGCGG CAGCCTGCCA CCGTTTATTC 
CCCCGGGCCA GCTGA
 
Protein sequence
MSLVPVLKVN NLSTHFHTRH GVIKAADRVS FTVAAGKTLG LVGESGCGKS VTALSILRLI 
EPPGRILSGE VWLNGCNLLK LPPGQLRQVR GREIALVFQD PLTSLNPVLT IGTQLAETIV 
SHEEVSRAEA RRRVAELLLR VGLPDPERLM RLYPFQLSGG MRQRVMMAMA LSLRPKVLIA 
DEPTTALDVT VQAQILAELK RLQEELGMAI ILITHDLGVV AAMADEVAVM YAGSIVERGP 
VAQVFDRPAH PYTRALLRSV PRLGREELVP VVGQPPLLLN LPAHCAFLPR CPQAGAACWG 
EKPELREIGP GHAAACHRLF PRAS