Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0358 |
Symbol | |
ID | 6026656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 384755 |
End bp | 386347 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641593210 |
Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
Protein accession | YP_001716548 |
Protein GI | 169830566 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCAA TCCAGATCTA CGATACCACC CTCCGCGACG GCACCCAGGG CGAGGGCGTC GCCTTCTCGG TGGAAGACAA GATCAAAATC ACCCGCCGGC TGGACCGGAT GGGCTTTCAC TACGTGGAAG GGGGCTGGCC GGGCTCGAAC CCCAAGGACC TGGAGTTCTT CCGGCAGATT AGAAACGAGC GTTTCCGCCA GGCCAAGGTC GCGGCCTTCG GCAGCACCCG CAAGGCGGGC CGCCCGGCCG ACCAGGACGC CAACCTCCTG GCTATCCTGG AGTCCGGCGT CTGCACGGCA ACCATTTTCG GCAAGAGCTG GGACTTTCAC GTCTACCGGG CGCTCGGCAC CACCCTGGAG GAGAATCTGG CCATGGTCGC CGACTCGGTG GCTTTCCTGA AGAGCCGCGG GCTGGAGGTG CTCTTCGACG CGGAGCACTT CTTCGACGGC TACCGGGCGA ACCCCCAGTA CGCCATGGCC GTGCTGCGCG CCGCCCAGGA CGCCGGGGCC GACATGGTGG TGCTCTGCGA CACCAACGGG GGCACTCTGC CCACCGAACT CAAGGAAATC GTCACCTACG TCCGGGAGGC CCTGGAAGTG CCGCTCGGCA TCCACGCCCA CAACGACGGC GGCCTGGCGG CGGCCAACTC CATCCTGGCC GTGGAGGCGG GCTGCATCCA GGTGCAGGGG ACCATCAACG GCTACGGCGA GCGTTGCGGC AACGTCGACC TCTGTACCGT GATCCCGAAC CTGGTCTTCA AAAAGCGGCT CGCCTGTATC CCCGAGGAGA ACCTCGTCTA CCTAACCGAC CTCTCCCGGT ACGTGTCGGA GCTGGCCAAC AAGAGCCCGG AGTCCCGCCA GCCCTTCGTG GGCACCAGCG CCTTCGCGCA CAAGGGCGGG ATCCACGTGA ACGCCCTTCT GAAGGACCGC CAGACCTACG AGCACATCCC GCCCGAGAGC GTGGGCAACA AGCGGCGGGT CCTGGTTTCC GAGCTGTCCG GCCTGTCCAA CCTGGTGTAC AAGTATCGCG AGCTAAACCT GGGCCCGGAG CGGGACAGCG CCGAGTACCG CCGCATCCTG AACGAATTGA AAGACCTGGA GCACCAGGGG TTCCAGTTCG AGGGCGCCGA AGGTTCCTTC GAACTCCTCA TGCGCAAGGC CTACAACGGC TACCAAAAGC CCTTCCGGCT GGAGACCATG CGCATCCTGA CCGAACTCCG GGACGAAGGG CACGTGTACA GCGAGGCGAT CATCAAGCTC CGCGTCAACG ACGAGATCGT GCACACCGCC GCCGAGGGGA ACGGCCCGGT GAACGCCCTC GACGCCGCCC TGCGCAAGGC TCTGGAGGAA TTCTACCCGG TTATCAGGAA CATGCGGCTC CACGACTACA AGGTGCGCGT CCTGAACGAG AAAGAAGGCA CCGGCGCGGT GGTCCGGGTG CTGATCGAAA CCGGCGACGG CCGGAAATCC TGGGGCACAG TGGGAGTTTC TTCCAACATC ATCGAGGCCA GTTGGCAGGC CCTGGCAGAC AGCTTCGCCT ACGGGATCCT GAAGCTCAAA GAGAACGGTG CACCCGACGC CCAGGCGCCG TGA
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Protein sequence | MSAIQIYDTT LRDGTQGEGV AFSVEDKIKI TRRLDRMGFH YVEGGWPGSN PKDLEFFRQI RNERFRQAKV AAFGSTRKAG RPADQDANLL AILESGVCTA TIFGKSWDFH VYRALGTTLE ENLAMVADSV AFLKSRGLEV LFDAEHFFDG YRANPQYAMA VLRAAQDAGA DMVVLCDTNG GTLPTELKEI VTYVREALEV PLGIHAHNDG GLAAANSILA VEAGCIQVQG TINGYGERCG NVDLCTVIPN LVFKKRLACI PEENLVYLTD LSRYVSELAN KSPESRQPFV GTSAFAHKGG IHVNALLKDR QTYEHIPPES VGNKRRVLVS ELSGLSNLVY KYRELNLGPE RDSAEYRRIL NELKDLEHQG FQFEGAEGSF ELLMRKAYNG YQKPFRLETM RILTELRDEG HVYSEAIIKL RVNDEIVHTA AEGNGPVNAL DAALRKALEE FYPVIRNMRL HDYKVRVLNE KEGTGAVVRV LIETGDGRKS WGTVGVSSNI IEASWQALAD SFAYGILKLK ENGAPDAQAP
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