Gene Daud_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0350 
Symbol 
ID6025426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp375465 
End bp376181 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID641593202 
ProductAzlC family protein 
Protein accessionYP_001716540 
Protein GI169830558 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.303967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCCTG ACGCCACCGT AGGGAACGCA CACCCGTCCG CGGAGCTCGC CGCGGGCGTA 
ACCCGGGCCG TACCGATCAT GCTCGGCTAC GTCGTCCTGG CCATAGCCTT CGGGATCCTG
GCCCGGGAGG CCGGCCTGAC CATTCCGGAG ACCATCGCCA TGTCCGTGAT CGTGTTCGCC
GGGGCCTCCC AGTTCATCGC CGCCGGGATG TTCGCCGCCG CCATGAGCCC GGCAGCCATC
ATCATGACCA CTTTCCTGGT GAACCTGCGG CACATCCTGA TGAGCGCCGC GCTCGCCCCC
TACCTGCGGG GCCTGCGGTT TCACTCCTAC GCTCTGCTCG GCTGGGGCGT CACCGACGAA
ACCTTCGCCT TGAACAGCAC CGAGTACAGC CGGCAGCCCC GCCACCACTG GTTCATCTAC
GGCACCAATT TCGCCGCCTA CGCCTCCTGG ATCACCGGTA CCGTGATCGG GGCGTTCTTT
GGGAGCATCG TGCCGGGAAT CGAACAACTG CCGCTGGGCT TCGCTCTGCC AGCCATGTTC
ATCTGCCTGC TGGTGATGCA GTTGAGTGAC CGGCTGCTCC TGTACGCCGC CGTGCTGGCC
GGCGGCCTCT CCCTGCTTCT GGGGCAGCTC CTGGAGGGCA ACTGGAACAT CATTCTGGCC
ACGGTCATTA CGGCCACGGT TGCTTCGGGA TGGGAAAAAT GGAAAAGCTC TGGATAA
 
Protein sequence
MQPDATVGNA HPSAELAAGV TRAVPIMLGY VVLAIAFGIL AREAGLTIPE TIAMSVIVFA 
GASQFIAAGM FAAAMSPAAI IMTTFLVNLR HILMSAALAP YLRGLRFHSY ALLGWGVTDE
TFALNSTEYS RQPRHHWFIY GTNFAAYASW ITGTVIGAFF GSIVPGIEQL PLGFALPAMF
ICLLVMQLSD RLLLYAAVLA GGLSLLLGQL LEGNWNIILA TVITATVASG WEKWKSSG