| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0275 |
|---|
| Symbol | |
|---|
| ID | 6025763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 295230 |
|---|
| End bp | 296042 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641593129 |
|---|
| Product | cobalt ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001716468 |
|---|
| Protein GI | 169830486 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCTT TCGAGGTCGC GGACCTCTAT TACACCTATC CGGACGGCAC TCCCGCCCTC
CAGGGAGTGT CCCTGGAGGC GCCGGCCGGG TCCCGGACGG CCCTTCTCGG AGCGAACGGC
AGCGGGAAGA GCACTCTCCT CCTGCACCTG AACGGCCTGC TTTCCGCGAG GCGCGGCTCG
GTCCGAGTGT TCGGCCGTGA AGTCGGCCCG GACAACCTGC GCGAAATCCG GCGCCGGGTG
GGCCTGGTTT TCCAGAACCC CGACGACCAG CTTTTTTCCA CTTCGGTGGC GGAGGACGTG
GCCTTCGGTC CCCGGAACCT GGGGCTGAAT CCCGGAGAGG TCCGGCGGCG GGTGATGTGG
GCCCTGGACA CCGTGGGCAT CACCGCGCTG GCCCGGCGCC CGCCGCACCA CCTAAGCCTG
GGCCAGAAGA AACGGGCGGC CATCGCCGGG GTGCTGGCCA TGGAGCCCGA CCTCCTGGTG
CTGGATGAAC CCACCGCCGG CCTCGACCCG TCCGGCGTGC GCCAGTTGAT GGAACTCTTG
GCCGTGTTTC ACGCCCAGGG CCGGACCATA GTCCTGGCCA CCCACGACGT GGACTTGGCG
TACGCCTGGG CCGACCGGGT GGCCGTTCTG GCGGACGGCC GGTTGGCAGC CGCTGGTCCC
GCCGCCCTGC TGGAGGACGA GGATTTGATA CTCTCGGCCG ACCTGGAACT ACCCGTGCTG
CTCAGGGTGT TCCGGAACAC CGGTGTCAAA CCGCGCGATC CGGTCGAGGC CAACGCGTGG
ATCCGCCGGC ACTGCCGGAC GTATGTAGAT TGA
|
|---|
| Protein sequence | MNAFEVADLY YTYPDGTPAL QGVSLEAPAG SRTALLGANG SGKSTLLLHL NGLLSARRGS
VRVFGREVGP DNLREIRRRV GLVFQNPDDQ LFSTSVAEDV AFGPRNLGLN PGEVRRRVMW
ALDTVGITAL ARRPPHHLSL GQKKRAAIAG VLAMEPDLLV LDEPTAGLDP SGVRQLMELL
AVFHAQGRTI VLATHDVDLA YAWADRVAVL ADGRLAAAGP AALLEDEDLI LSADLELPVL
LRVFRNTGVK PRDPVEANAW IRRHCRTYVD
|
|---|
| |