Gene Daud_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0184 
Symbol 
ID6027141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp211711 
End bp212187 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content55% 
IMG OID641593037 
ProductCarD family transcriptional regulator 
Protein accessionYP_001716380 
Protein GI169830398 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000461905 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTAAAA TCGGGGACAA AGTTGTTTAC CCCATGCACG GAGCCGGAGT GATCGAGGCG 
ATTGAAGAGA AAGAGATTCT GGGCGAGCGG CAGCAGTACT ACGTACTCCG CTTACCGGTC 
GGGAATATGA AGGTGATGGT ACCCACGGCG AACGGCCCGA ACATCGGACT GCGGCAGGTG 
ATCGGACAGG AGGAAGTCCA AAAGGTCTTC GGAATCCTCA AGGATGTAAG CACGCAGATG 
CCCGGCAACT GGAACCGGAG GTACCGGGCG AACCTCGAAA AGATAAAGAG CGGAAACATT 
TATGAGGTGG CCGAGGTGGT GCGGAATCTG GCCCGAAGGG AACGCGAAAA GGGGCTTTCC 
TCCGGCGAGA AGAGAATGCT GGAGAGTGCG CGGCAAATCC TGATCAGCGA GTTGGTGTTG 
GCCACGGAAG TGGAGGAAGA TAAGGCACGA TCGATGTTGG AAGAGATGTT TGCCTGA
 
Protein sequence
MFKIGDKVVY PMHGAGVIEA IEEKEILGER QQYYVLRLPV GNMKVMVPTA NGPNIGLRQV 
IGQEEVQKVF GILKDVSTQM PGNWNRRYRA NLEKIKSGNI YEVAEVVRNL ARREREKGLS 
SGEKRMLESA RQILISELVL ATEVEEDKAR SMLEEMFA