| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0182 |
|---|
| Symbol | |
|---|
| ID | 6027088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 208909 |
|---|
| End bp | 210246 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641593035 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_001716378 |
|---|
| Protein GI | 169830396 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.28154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGCC GGGAGTGCGG GTACCGATCG GTCCGTTGGC TCGGCCGTTG CCCGGGTTGC
GGGGAATGGC ACACCTTTGA AGAGGAAACC GAGGTGAAGG CGGCCCGCCG GGAGACTCTG
GCCGGCGACC CTCCCCGGCC ACTGACCGAA GTGGTCGGCG CTGAGGAAAC CCGTATCACC
AGCGGCATCG GGGAAATGGA CCGGGTTCTC GGAGGCGGCT TCGTTCCGGG GTCCGTGGTT
CTTCTGGGCG GCGACCCGGG AGTCGGCAAG TCCACCCTGC TCTTGCAGGC GGCCGTGCGT
GTGGCCGGTA TCGTGGGACG GGTGCTCTAC GTGTCGGGTG AAGAGTCGGC CCCGCAGGTA
CGGTTACGCG CCGAACGTCT GCGGGCGGTC CATTCGGGGC TCTACCTCGC GCCGGAAACC
GATATTGAGC GGGTTGAAAA GCATATTTCC GAACTGCGGC CCGTAGTCGT GATCGTGGAT
TCCATCCAGA CGGTGTCCCT GGACGGGCTG GCGGCGGTGC CCGGCAGCCT GGGGCAGGTC
AGGGAGTGCA CCGTGCGCCT GACCCGCCTG GCGAAGAGCA CCGGCATCCC GGTTCTCCTG
GTCGGACACG TCACCAAGGA AGGCGTGCTG GCCGGCCCCC GGACCATGGA GCACATGGTG
GATACGGTGC TGTACCTCGA GGGAGACCGG CACCATACCT ATCGCGTCCT GCGCGGGGTT
AAGAACCGTT TTGGTTCCAC GAATGAGATC GGCGTTTTTG AGATGGACTC CGCCGGGCTC
CGCGAAGTTG AAAACCCCTC ACGGCTGTTT TTGAGTTCCG GGGCCGCCCC CGTTTCGGGT
TCGGTGGTCG TGTCCTGCGT GGAGGGCACC CGTCCCCTGC TCGTCGAAAT CCAGGCCCTA
GTCAGTGCCG CGGGGTATGG TACTCCCCGA CGTATGACCG CGGGGGTCGA CTACAACCGC
GTCATCCTGA TGGCCGCCGT TCTTGAAAAG CGGGTCGGCC TGATGTTGAG CAGCCAGGAC
ATATACGTGA ACGCCGTCGG CGGTGTGAAA ATCTCGGAAC CGGCCGCCGA TTTGGGTATC
GCGCTTGCCC TGGTCTCCAG TTTCTGGGAC CGGCCGGTGC CGGCGGGCAC AGTGGTGATC
GGTGAGGTCG GCCTGACCGG GGAACTGCGC CCGGTGCCCC AACTTGGCAA TCGCCTGCGG
GAGGCCGCCA AGCTTGGCTT CGATAGCGCT GTTTTTCCGG CCGCCTCGGG CGGTTCAAAC
GAGCCCGGCG GGGAAAGTCT CCGGCTGTTT GCGGCGGGCA GCGTGAGCGA GGCTCTGGAT
TTGGTCTTGA CCAAATGA
|
|---|
| Protein sequence | MRCRECGYRS VRWLGRCPGC GEWHTFEEET EVKAARRETL AGDPPRPLTE VVGAEETRIT
SGIGEMDRVL GGGFVPGSVV LLGGDPGVGK STLLLQAAVR VAGIVGRVLY VSGEESAPQV
RLRAERLRAV HSGLYLAPET DIERVEKHIS ELRPVVVIVD SIQTVSLDGL AAVPGSLGQV
RECTVRLTRL AKSTGIPVLL VGHVTKEGVL AGPRTMEHMV DTVLYLEGDR HHTYRVLRGV
KNRFGSTNEI GVFEMDSAGL REVENPSRLF LSSGAAPVSG SVVVSCVEGT RPLLVEIQAL
VSAAGYGTPR RMTAGVDYNR VILMAAVLEK RVGLMLSSQD IYVNAVGGVK ISEPAADLGI
ALALVSSFWD RPVPAGTVVI GEVGLTGELR PVPQLGNRLR EAAKLGFDSA VFPAASGGSN
EPGGESLRLF AAGSVSEALD LVLTK
|
|---|
| |