Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0100 |
Symbol | panB |
ID | 6027074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 104797 |
End bp | 105627 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641592953 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001716300 |
Protein GI | 169830318 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCTGACA AGCGGCTCAC GACGCTGGAC ATCCGCCGGA AGAAAGAGGA AGGCCGGCCG ATCACAATGC TTACCGCTTA CGATTGCCCG ACGGCCCGGC TGGTGGACGA AGCGGGTATC GACATCGTCC TGGTGGGGGA CTCCGTGGGA AACGTTATCC TGGGGTACGA CTCCACCATT CCGGTGACCA TGGCGGATAT GCTCCACCAC ACCCGCGCGG TGAGCCGGGG GGTGAGGCGG GCCCTGGTGG TGGGCGACAT GCCGTTTCTT TCCTACAACG TGGACCGTGT GGAGGCGATC CGCAACGCCG GGCGCTTCTT GCAGGAAGGC GGGGCCCAGG CCGTAAAGCT CGAGGGCGGC CGGGAGGTGG CGGAAACCGT ACGGGTTCTG GTCAGCGCCG GGATTCCGGT GATGGGGCAC ATCGGGCTGA CCCCTCAATC GGTACACCAA TTGGGCGGGT ACCGGGTCCA GGGCCGGGAC GCGGCGTCGG CCCGGCGGCT CCTGGAAGAC GCCCGGATCC TGGAGGAAGC CGGAGTGTTC GCCATGGTGC TGGAGTGCGT GCCGGTGCCG CTGGCCCAAA GGATCACCGC GGCGGTGAAC GTGCCGACTA TCGGTATCGG CGCCGGACCC TATTGCGACG GGCAGGTGCT GGTCACCCAC GACCTGCTCG GGCTGTACGG CGGATTCACC CCGCGCTTTG TGAAACGTTA CGCCGCCCTG CACGGTGAAA TCGGCCGCGC GCTGCGGGAA TTCCGCGAAG AGGTGGAGTC CGGCCGTTTC CCGGCGGAAG AACACGGCTT TGCAATGCCT GAGGAAGAAC TGCCGGAATA A
|
Protein sequence | MADKRLTTLD IRRKKEEGRP ITMLTAYDCP TARLVDEAGI DIVLVGDSVG NVILGYDSTI PVTMADMLHH TRAVSRGVRR ALVVGDMPFL SYNVDRVEAI RNAGRFLQEG GAQAVKLEGG REVAETVRVL VSAGIPVMGH IGLTPQSVHQ LGGYRVQGRD AASARRLLED ARILEEAGVF AMVLECVPVP LAQRITAAVN VPTIGIGAGP YCDGQVLVTH DLLGLYGGFT PRFVKRYAAL HGEIGRALRE FREEVESGRF PAEEHGFAMP EEELPE
|
| |