Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0065 |
Symbol | |
ID | 6027491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 67770 |
End bp | 68660 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641592918 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001716265 |
Protein GI | 169830283 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTAA GCTACCTCGA AACCTTTGTA ATGGTCGCCA AGCACAAGAG CTTCTCACGG GCCGCCAAGA CCTTGAGCCT GACCCAACCC GCGGTGAGCA AGCACATTTC CCTGCTGGAG GCTCATTACG GCACCAAGCT TGTGAACCGC ACCAGCCGGC GCGTCGAACT GACCGACGCC GGCATTGTGC TGTACCATTT CGCCGGGCGG ATCATCGCAA CCATGGAACG GGCCAAAGAG GAAATCGTGT CCTTTTCCGA AGAGGTCAAG GGCCGCTTGA GCATCGGGGC GAGCACTATT CCCGGGCATT ACATCCTGCC CCGGATACTT AGTGATTTCA AGAAAGAGTA CCCCTTGGTG AATGTTTCCC TGGAAGTGAG CAATACCGGC AAGGTGATCA ACCGGCTCCA GGAGGAGGCC ATCCAGGTCG GGGTTATCGG CGCCCCGGTG GACAGCCCTG AGATCAACTG CACCGAGTTT TCCAGCGACG AAGTGGTCCT CATTATGCCC CGGGACCACC CTCTGGTTTT CCGAAAGGAA CTGGTCACCG ACGATCTGGT CGGTGAAAAG GTGGTCGTGC GGGAAAACGA CTCCGGCACG CGCCGCATTG TGGAGGAGAA ACTGGCCGCG GCCGACATTC CGCTTGACAG CCTGCAGATC GCCGGGGAGT TCGGCAGCAC GGAGGCGGTG CTGGCCGCCG TGGAGGCCGG ACTGGGCATT TCCTTCGTCT CCCGCTGGGC CGCGGAAAAA GTCGCGCTTG AAGGCCGAAT TGTTATGCGC ACCCTGCAAG ACCTGCGTTT CTCGCGCAGC CTATACATCA TCTACCTCCG GGACCGCAGT CTCTCCAGAC CCACCCACGC TTTTCTCTCG TTCATCAAAT TAGGTTCATA G
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Protein sequence | MNLSYLETFV MVAKHKSFSR AAKTLSLTQP AVSKHISLLE AHYGTKLVNR TSRRVELTDA GIVLYHFAGR IIATMERAKE EIVSFSEEVK GRLSIGASTI PGHYILPRIL SDFKKEYPLV NVSLEVSNTG KVINRLQEEA IQVGVIGAPV DSPEINCTEF SSDEVVLIMP RDHPLVFRKE LVTDDLVGEK VVVRENDSGT RRIVEEKLAA ADIPLDSLQI AGEFGSTEAV LAAVEAGLGI SFVSRWAAEK VALEGRIVMR TLQDLRFSRS LYIIYLRDRS LSRPTHAFLS FIKLGS
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