Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_0052 |
Symbol | |
ID | 6027284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 57426 |
End bp | 58871 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641592906 |
Product | hypothetical protein |
Protein accession | YP_001716253 |
Protein GI | 169830271 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0618003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCCATA AACTGAAAGT CAAGGTCTTA TGCCAGGAAG AAACGGTGCA GCAGGTCATC GGTGAAAAGA CCGTCCAGAC GGTGGTGCGC GGCGTGGTCA TCATCCCGCA GCCGAAACCG CCGGCCGAGC AGATCCTGGC GGTACGGGCC CAGGTTGAAG AACAGGAAAT CGACGTTATT CCCGACAAGG TTATCGTACA GGGCAAGCTC GTCCTCAACA TTACCTTCGT AGCCGATATC AAGACCCAGC CAGTGCACCA CGTACGCGGC CAGCTCGAAT TCGCGGAATC TCTCCACATT CCCGGCACCC GGCCGGGCAT GGACGTAGTG AAGCAGATCA CCATCGAGAA GGTTCGGGGC GAGGTTGATC CCCGTGATTC CCGCCGGATT GTCGTGACGA TGATCCTGCG CATTTTTGTT AAAGTGGTCG AAGTCGAGCC GAAACAGCTG CTGATCGACC TGCTCGGCGC CGAAAACCGA TTCAAGACGG AACCGGTCAA ACTGGATGTC GTCAAGGCGG TCGGGGCGAG GCAGGTGGTG ATCAGCGATC AGTTTGACGT TTTGCGGCAG TTCGAGGGCA AGAAACCCTG CCCCGAGGAA GTGCTTGATG TCATCGCCGA CGTTGTGGTC ACCAGGAAAG AGGTTATCCT CGAAAAGGTG ATCGTGGAGG GTGTCCTGAT CGTCCAGGTC ATCTACGTGG CCGACTGGCC CACGCAGCCG GTGCACCACG CCCACTTCGA GATTCCCTTC ACGGCGTTTG TCGAGCTAAC GGGCGCCCGC CCCGGGGATA TGGTCAGTGT CCAGGTGCAG ATCGAGGATG TCACCACCCG AGTCAAGAAC GACTGTGAGA TCATGATCGC CGCCGTCCTC AACGTTAAAG CCAGGATCGT TGAGCAGATC AAGAAGAAGC TGGTAGTGCA GATCGACAAG GATCTGCTTA AATGTCTCCT GTTCGAGGAC GCAATTCGGC CGGTGATCCT GTTCCTGGAC CAGATCTTGA ACGAGGAAGA CATGGTTCAG GTCACCATCC GCGAGGTTGT AAACATTCCG CAGCAGAAGC CGGACGCCCA GAAGATCCTG GAAGCTATGG TCACCAACAT CGAAGTGACC GAAACTGACG TAATTCCCAA CAAGGTGATC GTCCGAGGCG TTGTCACCGT CAAAGTGGTG TACGTGGCCG ACCGGCCCGA CCAGCCGGTC CACGCTTTCA CGGTTGACAT TCCGTTTACC ACCTTTGTCG ATGTACCCGG CGCCGTGCCC GGTGCGGCGG TGAACGTGAT GGTCGACGCC GAGTTCGTGC AGGCAGCCAT CGAAGACGCC CGCCGCGTCG TGATCAAGCT GGTGCTCAGG GTTACCGTCC GGGTGACCGA CATTGTCCAG AGACAGGTGT TTGAATGCCT GCGGCCCGGC GCCGTGATCG AGTGTCTGCT GCCGCCCAAA CCCTAG
|
Protein sequence | MTHKLKVKVL CQEETVQQVI GEKTVQTVVR GVVIIPQPKP PAEQILAVRA QVEEQEIDVI PDKVIVQGKL VLNITFVADI KTQPVHHVRG QLEFAESLHI PGTRPGMDVV KQITIEKVRG EVDPRDSRRI VVTMILRIFV KVVEVEPKQL LIDLLGAENR FKTEPVKLDV VKAVGARQVV ISDQFDVLRQ FEGKKPCPEE VLDVIADVVV TRKEVILEKV IVEGVLIVQV IYVADWPTQP VHHAHFEIPF TAFVELTGAR PGDMVSVQVQ IEDVTTRVKN DCEIMIAAVL NVKARIVEQI KKKLVVQIDK DLLKCLLFED AIRPVILFLD QILNEEDMVQ VTIREVVNIP QQKPDAQKIL EAMVTNIEVT ETDVIPNKVI VRGVVTVKVV YVADRPDQPV HAFTVDIPFT TFVDVPGAVP GAAVNVMVDA EFVQAAIEDA RRVVIKLVLR VTVRVTDIVQ RQVFECLRPG AVIECLLPPK P
|
| |