Gene Daud_0005 details

Gene Information

• Locus tag: Daud_0005
• ID: 6027591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 4195
• End bp: 6102
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641592853
• Product: DNA gyrase, B subunit
• Protein accession: YP_001716206
• Protein GI: 169830224
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGACAAAA ACGGTTCGGG GTACCGGGCC GAGGATATTC AGGTCCTGGA AGGCCTGGAG 
GCGGTTCGCA AACGTCCCGG CATGTATATC GGCTCGACCG GTCCGAAAGG TTTGCACCAC 
CTGATTTTCG AGGTGGTGGA CAACAGCATC GACGAGGCCC TGGCCGGATT CTGCGATTAT 
ATCGAGGTGG TTATCCACGC TGACAATTCG GTGACCGTTT CGGACAACGG ACGCGGGATC 
CCGGTGGATA TCCACCCGCA GGTGGGCCGG CCGGCCCTGG AAGTGGTCCT GACCAGGTTG 
CACGCCGGCG GGAAATTCGG CGGGACCCAA TACAAGATTT CCGGCGGCCT GCACGGCGTC 
GGCGTTTCCG TGGTGAACGC GCTCTCTAGG CGGATGGAGG TGGAGGTCAA ACGGGAGGGG 
TACCGCTACC GCCAGGAGTT CGAGCGCGGT CTAGCGACTG GAGAACTGGA GCTTTTGGAC 
GAGGCGGACG AAACCGGCAC GCGGGTGACC TTTATCCCCG ACCCTGATAT CTTTGAAGAA 
GTGGAATTTC AGTACGACGT GGTCGCCAAG AGACTCCGCG AGCTTTCTTT CCTGAACGCC 
GGCGTGACCC TGGTGCTCCG CGACGAGCGG ACCGGCCGCG ATAAGGTGTA CCAGTACGCG 
GGAGGCATCC GGGATTTCGT GCGCCACCTG AACCTGCACA AGGAAGTTCT TCCGGCCGAC 
CCCATCTACG TAGAGGACCA CAAGAACGGC GTTTGGGTGG AAGTGGCCGT TCAGTACGTT 
GTAAACTCCG ACCGGGAACT GATCTTTTCT TACGCCAACA CCATTCACAC GGTCGACGGC 
GGCACCCACG AAGCGGGGTT CAAGTCGGCG CTCACCCGCA CGATCAACGA CTACGCTCGA 
AAATACAACC TGGTCAAGAA CGATTCGTTA AGCGGCGAGG ACATCCGCGA GGGCCTAACG 
GCTGTGATCA ACGTCAAGGT GCCCGAACCC CAGTTCGAGG GGCAGACCAA AACCAAGCTC 
GGGAACAGTG AGGTGCGCGG TCTGGTGGAC TGGGTGGTGT CCCAACGCTT GGCCGCCTAC 
CTGGAAGAAC ACCCGACGGA GGCCAGACAG ATCGTACAGC GGGCGGTGGT CGCTTCCCGG 
GCCCGGGAGG CGGCCCGGCG GGCACGCGAG TTAACCAAGC GCAAGAGCCT TCTGGAGAGT 
GCGACCCTCC CCGGCAAACT GGCCGACTGT TCCCGGCGTG ATCCCCAACA CTCCGAGCTG 
TACCTGGTGG AGGGGGATTC GGCCGGCGGT TCGGCGAAAC AGGGCCGGGA CCGGGAATTC 
CAGGCGATTC TGCCGCTGCG CGGCAAGATT TTGAACGCCG AAAAGGCCCG CCGGGATAAG 
CTTTTGGGCA ATGAGGAAAT CCGGGCGCTG ATCACGGCGA TCGGCACGGG GTTCGGCGAG 
GACTTCGATC TGGCAAAAGC CCGCTACCAC CGGATCGTGA TCATGACCGA CGCCGACGTG 
GACGGCTCAC ACATCCGCAC CCTGCTCCTG ACCTTTTTCT ACCGGTACAT GAAGCCCCTG 
ATCGATGCCG GTTACGTGTA CATCGCCCAA CCACCGCTGT ACAGGGTCAG CGGCAAGGGC 
AGAAAAAACG GCGTGTACCT GTACAGTGAC CAGCAGCTGG AGCAGTTCTT CCGGGAAAAC 
GGGCGGCAGA ACTGGAGCAT CCAGCGCTAC AAGGGCCTTG GGGAGATGAA CCCGGAACAG 
CTCTGGGATA CCACCCTGGA CCCGGAAAAC CGGACGATGC TCCAGGTGAC CCTGGAGGAT 
GCCCTGGCGG CCGAGCAGCT TCTGTCCACC CTGATGGGGG AACAGGTGGA GCCGCGCCGG 
GAGTTCATTC AGCAGCACGC CCGGGAGGTC AGAAACCTTG ACATCTAG 

 

Protein sequence

MDKNGSGYRA EDIQVLEGLE AVRKRPGMYI GSTGPKGLHH LIFEVVDNSI DEALAGFCDY 
IEVVIHADNS VTVSDNGRGI PVDIHPQVGR PALEVVLTRL HAGGKFGGTQ YKISGGLHGV 
GVSVVNALSR RMEVEVKREG YRYRQEFERG LATGELELLD EADETGTRVT FIPDPDIFEE 
VEFQYDVVAK RLRELSFLNA GVTLVLRDER TGRDKVYQYA GGIRDFVRHL NLHKEVLPAD 
PIYVEDHKNG VWVEVAVQYV VNSDRELIFS YANTIHTVDG GTHEAGFKSA LTRTINDYAR 
KYNLVKNDSL SGEDIREGLT AVINVKVPEP QFEGQTKTKL GNSEVRGLVD WVVSQRLAAY 
LEEHPTEARQ IVQRAVVASR AREAARRARE LTKRKSLLES ATLPGKLADC SRRDPQHSEL 
YLVEGDSAGG SAKQGRDREF QAILPLRGKI LNAEKARRDK LLGNEEIRAL ITAIGTGFGE 
DFDLAKARYH RIVIMTDADV DGSHIRTLLL TFFYRYMKPL IDAGYVYIAQ PPLYRVSGKG 
RKNGVYLYSD QQLEQFFREN GRQNWSIQRY KGLGEMNPEQ LWDTTLDPEN RTMLQVTLED 
ALAAEQLLST LMGEQVEPRR EFIQQHAREV RNLDI