| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0002 |
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| Symbol | |
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| ID | 6027572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1579 |
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| End bp | 2748 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641592850 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001716203 |
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| Protein GI | 169830221 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.105928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTCC AGACCACCCG TGAAAGCCTC CTGGCAGGCA TCACCACCGT GATGCGCGCG
GTAAACCAAA AAAGTCCAGT AGCCGCCCTC TCGGGGATTC TCTTTGAGGC GGGTGCCGGT
GAAGCCGGTC AACAGGGGGT GTCACTGACC GGCAGCAATA TGGACTTGAC TATCCGGCGA
ATAATTCCGG CCGGCGTGAC CGTTTCCGGA GCGGTCGTGC TCCCGGCACG GCAACTGGCG
GAAATTGTAC GCCGCCTACC TGATGTTCCG GTTTCAATCA CGGCCGACCA CCAAAAGAAC
TCCGTGGAAC TGACTTACGG GCGTGCGCGC GCCCTTCTCA ACGGATACAG TGCCGCCGAA
TTCCCGAAGC CGGCCGACCC GCTGACGCGG GTACCCGGAG GCCGACCCGC TGACGCGGGT
ACCCCCCGTC TTGACATCAC TGCACCTTCA AAAGTGTTTC ACAACCTTTT TCGCCGGGTG
ATTTACGCGG CCGGCACGGA CGATCTGCGC CCCATTTTCA CGGGCGTGTT ATTGGAAATC
GACGAGGGCG AGATCAGGGC CGTGGCCACC GATACGCACC GGCTGGCCAT GCACCGCGTA
GACTATGAGG GTGAACCTGA AAACCGGAAA ATGCAGGTGA TTGTCTCGGG ACGGGCCCTG
GGGGAACTGG TCCGCGTGCT GTCCCAGGCG GAAGAGGAGC AGTTCGAAGT GACCATCGCC
GAAAACTATA TTGTTTTCTC GGTTGGCCCG ACCCGGATTA TCAGCCGTCT GATTGTGGGT
ACTTACCCCG ATTACCGGCA AGTAATCCCA AAGGTTCACC AAACCAGGGT TTCGGGCATT
GAAGCCCCCT TGCTGCTTCA GACAGTGGAA AGAGCGGCCA CCCTGGCTCA AGATGGCTCA
CCGGTGATAA ACCTTCACCT CGGGCAGGGG CTTCTAGGGG TTACCGCCCA ATCGGAGGCG
GGCTCAATTC ACGAGGAAAT TCCCGTGGAA CTGGCCGGAC AAGAATTGGA GATCAGCTTC
AATGCCAAGT ACCTCGAAGA AGCGCTCCGC TGGTGTGAGA GCACGCAACT GATTCTGGAC
TTTCACGGGC CCGTGGGCCC GGCCATAATC CGCCCCCTCG GAGACGGGGA TACATACCTG
GCATTGGTGC TTCCGGTCCG CCCGTTTTAG
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| Protein sequence | MQFQTTRESL LAGITTVMRA VNQKSPVAAL SGILFEAGAG EAGQQGVSLT GSNMDLTIRR
IIPAGVTVSG AVVLPARQLA EIVRRLPDVP VSITADHQKN SVELTYGRAR ALLNGYSAAE
FPKPADPLTR VPGGRPADAG TPRLDITAPS KVFHNLFRRV IYAAGTDDLR PIFTGVLLEI
DEGEIRAVAT DTHRLAMHRV DYEGEPENRK MQVIVSGRAL GELVRVLSQA EEEQFEVTIA
ENYIVFSVGP TRIISRLIVG TYPDYRQVIP KVHQTRVSGI EAPLLLQTVE RAATLAQDGS
PVINLHLGQG LLGVTAQSEA GSIHEEIPVE LAGQELEISF NAKYLEEALR WCESTQLILD
FHGPVGPAII RPLGDGDTYL ALVLPVRPF
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