Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4177 |
Symbol | |
ID | 3566541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 4473943 |
End bp | 4476294 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637682649 |
Product | transmembrane protein |
Protein accession | YP_287373 |
Protein GI | 71909786 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAC CGGCCGGCCG TGCTCTGCTG ATCTGGCTGT TGGCCATGCT GGCCGGGGGG CTGGTCGTCT GGAACAGCCA TTTCTCGGCC GACATGTCCT TCTTCCTGCC AGCCAAGCCA AGTGCCGAAC AGCAGGTGCT GGTCGACCAG CTCAAGGAAG GGGTCGTTTC CCGCCTGCTG ATGGTTGCTA TCGAAGGCGG CGATGCAGGG CAACGGGCCA CTGCCTCGCG CGACCTGCGC GGTCGACTGC AAAAACTGCC CGATTTCGCC TCGGTGCAGA ACGGCGAGAC CGCCAGCCTG GACGCCGACC GCGATTTTCT GTTCCACCAC CGCTACCTGC TCAGCCCGGC CGTCAAGCCG GAGCGTTTCA CGGTGGACGG CCTGCGCGAC GCCGTGGCCA ACAGCATCGA CCTGCTCGCC TCACCGGCCG GCATGATGCT GAAGCCCTTC TTGGCGCGCG ACCCGACCGG CGAACTGGTC GAGATGCTGT CCGGCCTCAA CGCCGGCGCC CAACCGAATG TCCGTGATGG CGTCTGGGCC TCGCGCGATG GCGAACGCGC CATGCTGCTG ATCCAGACGG CCGCCCTCGG CTCCGATACT GACGGTCAGG AAAAGGCCAT CGACCTGATC CGCAGCCAGT TCTCGGCAGG CACGCCCGGT GGCGAACTGA AGGTGCAGCT CTCCGGCCCC GGCCTGTTCG CGGTCAAATC GCGGGAAACC ATCAAGGCGG AAGTCAGCCG GCTATCCACG ATCAGCACAT TGGCCATCAT CGCAGTGCTC TTCTTCGTCT ATCGCTCGGC TCGCCTGATG ACGCTTGGCC TGTTGCCGGT CGTCAGCGGC GCACTGGCCG GCATCGTCGC GGTCAGCCTG GCTTATGGCA CGGTCTTCGG CATCACCGTC GGCTTCGGCT CGGCGTTGAT CGGTGAGGCA GTCGATTACT CGATCTACTT TTTCGTCCAG TCCAGCCGGC TCGGCGTCGA TCAATGGCGT GAACGCTTCT GGCCAACCAT CCGGCTCGGC GTACTGGCCT CGATTTTTGG TTTCGCCGCG CTGCTTTTTT CCGGCTTCCC CGGCCTTTCA CAGCTCGGAC TCTATTCGCT GAGCGGCGTT CTCACTGCCG CGCTGGTCAC CCGTTTCATC CTGCCGCCGC TGGCCGGACA AAATTTTGCC ATGCGTGACC TCAGTCATCT CGGCCCGGTG CTCAAGCGCT GCATCACCAT GCTGCAAGCA CTGCGCTGGC CAGTACTCCT CCTGACCCTG GTTGCGACGG GCTTTCTCGC CGCCAACCAC GATCACCTGT GGCACCCGAA CCTGTCGGCG CTGAGTACGG TCAGCGCCGA AGACGGCGCC GTCGACCAGG CCCTGCGCGC CGACATTGCC GCCCCGGATT CCCGCTACAT GGCGGTCATC ACTGCTGAAA ACCGCGAAGC CGCGCTGCAG GCAGCCGAAC GAGCCGGGCA GCAACTCGAC GGGCTGATCG CCCAAGGCAT TATCGGTGGC TACGACAGTC CGGCTCGCTT CCTGCCCAGC CAGGCCATGC AGAGCAGCCG CCGCGCCAGC CTGCCGACGA GCGACGAACT GCAATCCCGC CTGCAAGTGG CACTGACCGA TTCGCCACTG GCTGCCAACA AGCTGGGGGG CTTCATTGAA GACGTGGCCA AAGCCCGGGA GCAAGGCAGC CTGACCCGCG AAGCGCTGAA TGGCACCAGC CTGGCCTTGG TGGTCGATTC GCTGCTGCTC CAACGCCCGA ACGGCTGGAG CGTACTGCTG CCGCTCCGCC CGCCCGGTGG CGAGAAGGGG ATCGATTTCG CCATCGAACC GGTACGTGCC GCGCTGGCCG GCAGCGGCGC CTTGTTCATC GACATGAAAA ACGAGTTCGA CACGCTGTAC AACGACTACC TGCACGAGGC GACACTGCTC TCGCTGGCCG GTTTCGCCGC CATCGTCGTG CTGCTGGCGA TCACGCTGCG CTCCCCCCGG CGGCTGGCCA CCGTGCTGTT GCCGCTGCTG ATTGCCGTCG TGCTGGTCAT CGCCGGCCTG CATCTGGCTG GCGAGCGACT ACACCTGCTG CACCTGATCG GCATGCTGCT GATCGTCGCC GTCGGCTCCA ACTATGCACT GTTCTTCGAC CGGGCCGCCA ACGGGGAAGG GCTGGACAGC CCGACGCTGG TCTCGATGAC CGTCGCCAAC CTGACCACGG CCATCGGCTT CGGCACCCTG GCCTTATCCA ACGTGCCGGT GCTGCACGCC GTCGGCGCCA CGGTCGGGCC GGGCGCGGTA CTCGCCTTGT TGCTCTCGGC CTGCTTTGTC GGGAAAAAAC AGCCAGGCGT TTCACGTGGA ACCGAGGCAT GA
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Protein sequence | MTRPAGRALL IWLLAMLAGG LVVWNSHFSA DMSFFLPAKP SAEQQVLVDQ LKEGVVSRLL MVAIEGGDAG QRATASRDLR GRLQKLPDFA SVQNGETASL DADRDFLFHH RYLLSPAVKP ERFTVDGLRD AVANSIDLLA SPAGMMLKPF LARDPTGELV EMLSGLNAGA QPNVRDGVWA SRDGERAMLL IQTAALGSDT DGQEKAIDLI RSQFSAGTPG GELKVQLSGP GLFAVKSRET IKAEVSRLST ISTLAIIAVL FFVYRSARLM TLGLLPVVSG ALAGIVAVSL AYGTVFGITV GFGSALIGEA VDYSIYFFVQ SSRLGVDQWR ERFWPTIRLG VLASIFGFAA LLFSGFPGLS QLGLYSLSGV LTAALVTRFI LPPLAGQNFA MRDLSHLGPV LKRCITMLQA LRWPVLLLTL VATGFLAANH DHLWHPNLSA LSTVSAEDGA VDQALRADIA APDSRYMAVI TAENREAALQ AAERAGQQLD GLIAQGIIGG YDSPARFLPS QAMQSSRRAS LPTSDELQSR LQVALTDSPL AANKLGGFIE DVAKAREQGS LTREALNGTS LALVVDSLLL QRPNGWSVLL PLRPPGGEKG IDFAIEPVRA ALAGSGALFI DMKNEFDTLY NDYLHEATLL SLAGFAAIVV LLAITLRSPR RLATVLLPLL IAVVLVIAGL HLAGERLHLL HLIGMLLIVA VGSNYALFFD RAANGEGLDS PTLVSMTVAN LTTAIGFGTL ALSNVPVLHA VGATVGPGAV LALLLSACFV GKKQPGVSRG TEA
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