| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4111 |
|---|
| Symbol | |
|---|
| ID | 3566727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 4408952 |
|---|
| End bp | 4409488 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637682583 |
|---|
| Product | H+-transporting two-sector ATPase, delta (OSCP) subunit |
|---|
| Protein accession | YP_287307 |
|---|
| Protein GI | 71909720 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.000000000243479 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT CCGTCACTAT CGCCCGCCCT TACGCCGAAG CCCTGTTCCG CACGGCCAAG
GAAAGCGGCA ATCTGGCCAA GTGGTCCGAG CAGGTCTCCC TGCTTGGACA GGTGGCTGCC
AATCCCGATG TCTCTTCTGC CATCGGTGAT CCCAACGTGG CAGCCCCGCA ACTGGTCGAC
CTCTTCCGGT CTGCCTGCGG TACGGCGGTA GATGCGGAGC TGTCGAACTT CATCCAGCTG
CTGTCCAACA ATGACCGTCT GGGGCTGTTG CCGGAAATCG CCGGCTTGTA CGAAACCTAC
AAGCGCGCCG AAGAAGGCAC CAAACAAGCC GATATCGTTT CGGCTTTCCC GATCGATGAC
AATCAGGTGA AAGCCCTGAT ACCCCAACTC GAAGCCGTCT TCAAGACCAA GCTCGAGGCC
GCAGTGTCGG TTGATCCGAC CCTGATCGGC GGTATCAAGG TAATCGTTGG CGACCAGATG
CTGGATGCTT CAGTCCGCGG CAAGCTTGAC GCCATGGCTA CGGCGCTGAA CAACTAG
|
|---|
| Protein sequence | MAESVTIARP YAEALFRTAK ESGNLAKWSE QVSLLGQVAA NPDVSSAIGD PNVAAPQLVD
LFRSACGTAV DAELSNFIQL LSNNDRLGLL PEIAGLYETY KRAEEGTKQA DIVSAFPIDD
NQVKALIPQL EAVFKTKLEA AVSVDPTLIG GIKVIVGDQM LDASVRGKLD AMATALNN
|
|---|
| |