| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_4030 |
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| Symbol | |
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| ID | 3567202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 4328613 |
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| End bp | 4330754 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637682503 |
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| Product | TonB-dependent receptor:Lipocalin |
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| Protein accession | YP_287227 |
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| Protein GI | 71909640 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCT GGGAAGGCGA TACGTCAAGA CTTGTGAGCC CGGATACCGG CCTGGAACAC
CCATTGGAAG TGCCACGGGG TGGTGGTGCC GGTTTCTCGA CCAGCTGCCT CCCGCGCTTC
CGTCTCAACG CATTCCGGCA GCGGGGACGT CTGCCGGGAA AGGAAAGCTC CGTGAAGCCG
CAATATCTCG TTTTCTCCCT GCCCTTGTGC ATTTCGAGCG TTTTCGCCCA TGACGCCGCA
GAAATGCCGG CGGTCGTCGT TTCGGCAACC CGCTTCGAGC AAATCGACTC CCGCCTGCCA
GCCAATATCA CCGTGATCTC TGCGCAGGAT ATTCGTCAGA GCCCGGCCAG CAATTTGCCC
GACCTTCTGA AAACCCAGGC AGGTATCGGT GTCAGCGCAC TTTATGGCAG CTTCGGCATC
GATGCCAGCG TCGATCTGCG CGGCTTCGGC CCAGCCACTG CGTCGTTGAA CACACTTATC
TTGCTCGATG GTCAGCGCCT CAACCCCGCG GCTATGGAGT CGGTCAACTG GTCGTTGATC
CCCTTGAACA ACATCGAGAG AATCGAAATC ATGCGCGGCT CGGGTACCGT GCTCTACGGT
GACGGCGCCA GCGGCGGGGT GGTCAATATC ATCACCAAGA AAGCGACAGG TTCGCAGCAG
AATATTACGC TCGGCGCCGG CAGCAACGGG CTGCTCACCA CCGATGCGCA ACTGTCCGCT
CGCGGTGAAA GCGCTCACAT CAACCTGGCT GGACACTTCG CCGACACCAA TGGCTGGCGC
CAGAACTCGG CCGCCACCCA GACTTCGCTG GCCGGCCGAG TCGGCATTGA TGGCAGCAGC
GCCAAGGGTT TCGTCGACTT TTCCGGCTTC GATGAAAGCG CCAGGCTGCC GGGTGCTCTC
TCGCAAGCCG ACTACGATCA GCGCCCGCGC TACTCGAAAA CACCACAGGA TCACCAGCAT
CGCGACGGCT TCCGGATTCG CCCGGGCGTT GAAGCCGAAA TCGCCCAGAA TCTGTTGTTC
AATGCCGAGT TTTCCTTCGA CCAAGATAAC TACGACTCGT ACTCCGGCGT CTATCGCTCC
ACTTACGAGC GGGAGAAAGA GCACTGGTCC TTCACGCCTC GCCTGCGCTG GGCGCATGGC
CTGCCCAGCC TGGCCGCCAG CGAGACCGTG ATCGGTTTCG ATCAGTACCA CGGCGACTGG
CGCTCAGTCA GCAACAGCGC ACTGTTTGGC ATTTCCCGCG CCCGCGCCGA GCAGGACAGC
CAGGCCCTGT ACCTGCAGAA CCTGACCCAC TTCGATGAGC ACTGGGGCCT GATGCTCGGC
GCCCGTTCGC AGCGCATGTG GCAAAGCGCC GCCGACAGTT CGATTCAGGG CGAAACCCAG
CGCACGAAGA ACGCCGGAGA AATCGGCCTG ACGTATGCCG GCAGTCACTG GCAGGTCTAT
GGCAAGGTAG GCACCACCTT CCGTTTCGCC AATACCGACG AGCTGTTCGG TTACGACATC
ATGTCCGGAA ACTCCGTGTT TTCCGCCAAC CTGCGCCCCC AACACGGCAC CATCAAGGAA
ATCGGCGCCT CTGCCCGCCG GGGTGACATA TCGGTCAAAG CCGCGGCCTT CGACATGAAG
CTGACGGATG AAATCCTGTT CGACAGCAAT TTGTACACCA ACATCAACAC CGACCCGACC
CAGCGCCGGG GCATCGAACT GGAAGCGCAA TGGCAGGCCA CCTCGAGCCT CGCCTTGCGC
GGCAGCTATA CCTATCTGGA CGCGACCTAC CGCAGCGGCT CGTTCACTGG CAAACAGATC
CCGATGGTCG CCGAAAACAA GGGCGCCCTG GCGCTACAGT GGAATGCCCA GCAATTCGGC
CAGTACAGCG CGACAGTCAA TTACGTCGGA GAACGCTACG TTAGCGGCGA CTATGCCAAC
ACGCGGAGGC AGGTGGGTGG CTATACGACA ACGGACCTGA TGGCCGCCTG GAAATTCAGC
CAATGGACGA TTGCCGCCAA GGTACTCAAT GCCTTCGACA AGAAATACGC CAACTGGGCG
ACTTATCAGT CGAGCGCTGC TTACGGCTAC GCGACCGATT ACTACTACTA TCCTGCCGAC
GGGCGTAGTT TTGTCATGAC TGCCCGCTAT GACTTCAAAT AA
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| Protein sequence | MTTWEGDTSR LVSPDTGLEH PLEVPRGGGA GFSTSCLPRF RLNAFRQRGR LPGKESSVKP
QYLVFSLPLC ISSVFAHDAA EMPAVVVSAT RFEQIDSRLP ANITVISAQD IRQSPASNLP
DLLKTQAGIG VSALYGSFGI DASVDLRGFG PATASLNTLI LLDGQRLNPA AMESVNWSLI
PLNNIERIEI MRGSGTVLYG DGASGGVVNI ITKKATGSQQ NITLGAGSNG LLTTDAQLSA
RGESAHINLA GHFADTNGWR QNSAATQTSL AGRVGIDGSS AKGFVDFSGF DESARLPGAL
SQADYDQRPR YSKTPQDHQH RDGFRIRPGV EAEIAQNLLF NAEFSFDQDN YDSYSGVYRS
TYEREKEHWS FTPRLRWAHG LPSLAASETV IGFDQYHGDW RSVSNSALFG ISRARAEQDS
QALYLQNLTH FDEHWGLMLG ARSQRMWQSA ADSSIQGETQ RTKNAGEIGL TYAGSHWQVY
GKVGTTFRFA NTDELFGYDI MSGNSVFSAN LRPQHGTIKE IGASARRGDI SVKAAAFDMK
LTDEILFDSN LYTNINTDPT QRRGIELEAQ WQATSSLALR GSYTYLDATY RSGSFTGKQI
PMVAENKGAL ALQWNAQQFG QYSATVNYVG ERYVSGDYAN TRRQVGGYTT TDLMAAWKFS
QWTIAAKVLN AFDKKYANWA TYQSSAAYGY ATDYYYYPAD GRSFVMTARY DFK
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