Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4009 |
Symbol | |
ID | 3567220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4309477 |
End bp | 4309995 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637682482 |
Product | PAS |
Protein accession | YP_287206 |
Protein GI | 71909619 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 78 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAG CGATAAAACC GACCAGCGTT GAGCGAAAAA TGCGTGAAGA TGACTTCATC GTTTCCAAAA CCAACGCCAA AGGCATCATC ACTTACGGGA ATCCGATTTT TATCGAATTT TCCGGCTATA CAGAAGAAGA ACTGCTGGGT TCCCAGCACA ACATCATTCG TCATCCGGAC ATGCCCAGAT CGGCCTTCAA GCTGGTTTGG GACACGATCC AGTCAGGCAA GGAATTCTTT GGCTACGTAA AGAACATGTC GAAGGACGGT GGTTTTTATT GGGTCTTTAC CCACATTACG CCGGATCTGG ATTTGTCCGG GAATATTGTC GGTTATACCT CTGTCCGGCG TTGCCCCAGC GCGGAGGCCG TGCGCAAGAT TGAGCCAGTC TATCGCGCCA TGCTCGAGGC GGAACGCTCG GCCGGAGCGC GCTCGGCGAT GGAAGCCGGA ACCAATGTTT TGCTCGAAAT CATGAATCAG TCAGGAGTGA GTTATGAAGA ACTCGTCTTC TCGCTCTAA
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Protein sequence | MKRAIKPTSV ERKMREDDFI VSKTNAKGII TYGNPIFIEF SGYTEEELLG SQHNIIRHPD MPRSAFKLVW DTIQSGKEFF GYVKNMSKDG GFYWVFTHIT PDLDLSGNIV GYTSVRRCPS AEAVRKIEPV YRAMLEAERS AGARSAMEAG TNVLLEIMNQ SGVSYEELVF SL
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