Gene Daro_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4008 
Symbol 
ID3567219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4308216 
End bp4309502 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content60% 
IMG OID637682481 
Productchemotaxis sensory transducer 
Protein accessionYP_287205 
Protein GI71909618 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACT CGTCTTCTCG CTCTAAAGCG CAACTTTTCC TGGCTATCCT GCTGTTGCTG 
GCTTTGGGTC TGGGATTTCT TTCACCGTGG GCGTCTGCGG CTTGTTTGGC GGTAGCCTTG
CTGGTTCTAC TCTGGCCCAA CGCCAGTTCG GTCAAGGAGC TCTCAACGCT TGATGCATTG
CTGCGTCAGG TCGGCAAGGG GGAACTGGTC GCCCGCTTGC CTCATGCCAT GGGTGATCCA
ACGCTGGAAT CGATCCGGGT TAACCTCAAC TCGGCGCTCG ACCAGACTGA AACGGCTTTT
CGCGAAATCC TGGGCGCGAT GCAAGCCTCA TCGACGGGCC GGACATGGCG AAGGCTCCAG
CGACCGGGCC TGCATGGCAC CTTCGGTACC GTCCTGGCCC AGATGCAGGT GTTGCTGGAT
CAGCTTGAAG AGGCTCAGGA GTCGATTGCG CGAGAGGCGC TTCTGTCACG AATTTTCCTG
CGCTCCGAGC GTGGCTTGTC GATGGCCATT GAGCACGTCG ACAAAGCCTT GTTCGAAGTG
GGCGGCAACT CAAAACTGTC GCAGCAGTTG GCAGGTGATT TTGGCGAATC CGCCTCGGCG
ATGTCGAGTT CGGCGCAGCG CATGTCCGAT GCACTCGGCG GGGCGCAGCA GGCAGCTGAG
GCTGGCGTCA GCGCACTCGA CGACCTCAAT GCCAAGGCGG CAGCGATTCA TCTGCTGACA
GGCCAAATCG AAGGGGTGGC GAAACAGACC AATCTTCTGG CGCTCAACGC CGCCATCGAG
GCGGCACGGG CCGGTGAAGC CGGGCGAGGC TTTGCAGTCG TCGCCGATGA GGTACGTAAA
CTGGCCGATC AGGCACAGCG TTCGGCCGAA GAAATCGCCG CAGCGATTTC GGCGATCAGC
ACCTCAATGC AATCGGCCAC GGTCCAGATC GGTGATCTGC AACATGCAGT GTCTGGAGCG
CGGCTTACCG CAGGCGAATT CAGCAGTGAG CTGGCCAATT CGGCGACCTC GGCCAATCGC
GTTTACGACT TGGCAAGTAC GATAGGGGAA GGCGCCCACT CCATGGAGTC TTCAATGCGT
CTGGTGGCCA CCGCCCAGCG GGCGCGGGCC GATGTGACGG CTATTCTCCA CGGCGAGGAG
GTCAATATCT CTTCGCTGAG CGAAATGGAG CAGGAAGCGG CGAATATTGC GCGTTCCCGC
AAATGGATCA AGGGAAGCTC AGACCGTGAG GCCTTGGTGG CGATTTACGA CAGCCTGTTC
GCCAATATCG AAAGGCAGAT GCACTAA
 
Protein sequence
MKNSSSRSKA QLFLAILLLL ALGLGFLSPW ASAACLAVAL LVLLWPNASS VKELSTLDAL 
LRQVGKGELV ARLPHAMGDP TLESIRVNLN SALDQTETAF REILGAMQAS STGRTWRRLQ
RPGLHGTFGT VLAQMQVLLD QLEEAQESIA REALLSRIFL RSERGLSMAI EHVDKALFEV
GGNSKLSQQL AGDFGESASA MSSSAQRMSD ALGGAQQAAE AGVSALDDLN AKAAAIHLLT
GQIEGVAKQT NLLALNAAIE AARAGEAGRG FAVVADEVRK LADQAQRSAE EIAAAISAIS
TSMQSATVQI GDLQHAVSGA RLTAGEFSSE LANSATSANR VYDLASTIGE GAHSMESSMR
LVATAQRARA DVTAILHGEE VNISSLSEME QEAANIARSR KWIKGSSDRE ALVAIYDSLF
ANIERQMH