Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_4007 |
Symbol | |
ID | 3567218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 4307505 |
End bp | 4308206 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637682480 |
Product | GntR family transcriptional regulator |
Protein accession | YP_287204 |
Protein GI | 71909617 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 79 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCGAC TTGCCCATTC ACACCACACC AAAACCATGA ACCGTATCGC ACCAACCGCG CTTTATCAGG AAGTGGCAGA ACGACTGCGC CAACGCATCT TCGCCCACGA ACTGACCCCC GGCACCTGGA TCGACGAGCA AAAACTCGCC GAGCAGTACG GCATTTCACG CACACCCTTG CGTGAAGCAC TCAAGGTACT CGCCTCCGAG GGACTGGTTG AACTTCGGCC GCGGCGTGGT TGCTACGTCA CTGAAATTTC CCGCCAGGAT CTGGACGACA TTTTCCCGCT GATGGCCATG CTGGAAGGAC GTTGCGCCGC CGAAGCGGTC AAGAACGCCA AGCCTGTCGA CATCGCCGCG CTCAAGGAAA TACACGAGCG ACTGGAATCG GCTGCGCGCG ACGGTCGCAT CGATGCCTTC TTCGAGGCCA ACCAGGAATT CCACAAGAAA ATTCAGGAAC TCTCCGGCAA CCGCTGGCTG CTCTCGGTGA TCCAGGATTT GCGCAAAGTA TTGAAGCTGT CGCGCCTGCA TTCCCTGTCG CTGGAGGGCC GCCTGCAGCA ATCGCTGGAT GAACACCGCC TGATCATGGC GGCGCTCTCT TCCAGCGATG CCAGCCGTGC CGAAAAGCTG ATGCATGACC ACCTGCTTTC CGGCCGCGAA GCACTGGCCA AGATGGATGC CAAAGCCCCC AAGGCGGCCT GA
|
Protein sequence | MHRLAHSHHT KTMNRIAPTA LYQEVAERLR QRIFAHELTP GTWIDEQKLA EQYGISRTPL REALKVLASE GLVELRPRRG CYVTEISRQD LDDIFPLMAM LEGRCAAEAV KNAKPVDIAA LKEIHERLES AARDGRIDAF FEANQEFHKK IQELSGNRWL LSVIQDLRKV LKLSRLHSLS LEGRLQQSLD EHRLIMAALS SSDASRAEKL MHDHLLSGRE ALAKMDAKAP KAA
|
| |