Gene Daro_4007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_4007 
Symbol 
ID3567218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4307505 
End bp4308206 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID637682480 
ProductGntR family transcriptional regulator 
Protein accessionYP_287204 
Protein GI71909617 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones79 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAC TTGCCCATTC ACACCACACC AAAACCATGA ACCGTATCGC ACCAACCGCG 
CTTTATCAGG AAGTGGCAGA ACGACTGCGC CAACGCATCT TCGCCCACGA ACTGACCCCC
GGCACCTGGA TCGACGAGCA AAAACTCGCC GAGCAGTACG GCATTTCACG CACACCCTTG
CGTGAAGCAC TCAAGGTACT CGCCTCCGAG GGACTGGTTG AACTTCGGCC GCGGCGTGGT
TGCTACGTCA CTGAAATTTC CCGCCAGGAT CTGGACGACA TTTTCCCGCT GATGGCCATG
CTGGAAGGAC GTTGCGCCGC CGAAGCGGTC AAGAACGCCA AGCCTGTCGA CATCGCCGCG
CTCAAGGAAA TACACGAGCG ACTGGAATCG GCTGCGCGCG ACGGTCGCAT CGATGCCTTC
TTCGAGGCCA ACCAGGAATT CCACAAGAAA ATTCAGGAAC TCTCCGGCAA CCGCTGGCTG
CTCTCGGTGA TCCAGGATTT GCGCAAAGTA TTGAAGCTGT CGCGCCTGCA TTCCCTGTCG
CTGGAGGGCC GCCTGCAGCA ATCGCTGGAT GAACACCGCC TGATCATGGC GGCGCTCTCT
TCCAGCGATG CCAGCCGTGC CGAAAAGCTG ATGCATGACC ACCTGCTTTC CGGCCGCGAA
GCACTGGCCA AGATGGATGC CAAAGCCCCC AAGGCGGCCT GA
 
Protein sequence
MHRLAHSHHT KTMNRIAPTA LYQEVAERLR QRIFAHELTP GTWIDEQKLA EQYGISRTPL 
REALKVLASE GLVELRPRRG CYVTEISRQD LDDIFPLMAM LEGRCAAEAV KNAKPVDIAA
LKEIHERLES AARDGRIDAF FEANQEFHKK IQELSGNRWL LSVIQDLRKV LKLSRLHSLS
LEGRLQQSLD EHRLIMAALS SSDASRAEKL MHDHLLSGRE ALAKMDAKAP KAA