| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3977 |
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| Symbol | |
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| ID | 3567266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4274819 |
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| End bp | 4277110 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637682450 |
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| Product | hydrogenase maturation protein HypF |
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| Protein accession | YP_287174 |
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| Protein GI | 71909587 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCC GCCTGCTCCG TATTCGTGGT CTGGTGCAGG GGGTCGGTTT TCGTCCTTAT
ATCTGGCGCC TGGCCAACGA ACTCGGGCTG ACGGGCTGGG TGCGTAACGA CGGCGCCGGG
GTGATTGCCG CAGTTGCCGG CGAAAAGGTC GCTGACTTCG TCACTCGCCT GCCGCAGGAA
GCGCCCCGCT TGGCGCGCAT TGACGCCATC GAGAGCGAGG CCGCTGTAGT AAGTGCTCAG
GGTTTTGCCA TCCTCGATAG CGAATCCGGC GAAGTGCAGA CGGCCATCGG TCCCGATGCT
GCGATCTGCC CCGAGTGCAT CGCCGATATC TGCAATCCGG CCAGCCGCCG CTGGCGCTAT
GCCTTCACCA CCTGCACCCA TTGCGGTCCT CGCTACACGA TCAGCCGTCG TATTCCCTAT
GACCGGGCGC AAACCTGCCT CGCCGCCTTT CCGCTTTGCG CGCCGTGCAA TGACGAATAC
ACAACGCCCA GCGACCGCCG CTTTCACGCT GAAACCACCT GTTGCCCGGA TTGCGGCCCG
CAATTGAGCC TGCTGGATGC CGGTGGTCTG CCGCTGGATG GCGATCCGAT TGCCGCATGC
TTGCACCTGT TGCGCGCTGG CAAAATCGTT GCGATCAAGG GCTTGGGCGG CTTCCATCTG
GCCTGCGATG CGCGCAATGC CGTCGCCGTG GCCGAACTGC GTGAACGCAA GCAGCGCGAG
GAAAAGCCTT TGGCGGTGAT GGGGCTGAAC GCCGACGCAT TGGCCGACTA CGCGCGAATC
GGCAAGGCAG AGTTGGCCCT GCTGCAAAGC ACGGCCGCTC CGATCGTACT CTGTGCCAAG
GGCGCGACCG AACTTCAGGG CATCGCACCT GGCCTGGCCT GGTTCGGTGT CATGCTGCCG
GCAACGCCGC TGCACCTGTT GCTTTGGCAC GAAGCAGCCG GCCGGCCGAG CGGCAGCGCT
TGGCTGGGCG AGCCGAATGA GTTGCTGCTG GTCATGACCA GCGCCAACCC GCACGGTGAG
CCGCTGGTCA TCGCCAACGA CGAAGCACTG GACAGGCTGA CCGGCATTGC CGATGCCTAT
CTGATGCACA ACCGCGACAT CGTCATCCGT TGCGATGATT CCGTATTACG GGTGACGCCG
GGCGGTCCAG CTTTCATCCG CCGTGCCCGT GGCTACGTGC CGGTGCCCAT TTCCCTGGTT
GATGATGGCC CGAGCGTGCT GGCGCTGGGC GGCTACCTGA AGAACACCAT TTGCGTCATG
AAAGGCCGCG AAGCCTTCCT GTCGCAGCAT ATCGGCAGCC TGGACAACGT TGCGGCCATC
GGCTTTCTCG AAGAAACGGT CGATCATCTG CTCGGCATCC TTGACGTCAA GCCCGAGCTG
ATCGCGCATG ACCTGCACCC GGACTTTCCA TCGACCCATC TTGCGCTGCA ACTGGCCGAA
AAATACGCTA TCCCGGCGGT CGCTATCGGT CATCACCAAG CCCATCTTGC CGCGATCTGC
GCCGAACATG GCGTCAACGG TCCGGTCGTC GGGCTGGCGC TGGATGGGGT CGGTCTCGGC
CCGGACGGTG GTGCCTGGGG CGGCGAACTG CTGCGCCTCG ACGGCGCCAA CTGCGAACGC
CTCGGCCACC TCCACCGACT GGCCATGCCC GGCGGCGACC GAGCGGCCAA GGAGCCGTGG
CGCATGGCCG TTGCTGCGCT GCATGGGGCC GGCCTGGGCT ACCGGGTCGG TGGCTGGATC
AAGCAGTACT ACCCGACGCG CGACCCCGGC CCGCTGCTCA CCATGCTTGC CCGCCATCTG
CGCTGCCCGC AGACGAGCAG CCTCGGCCGC TGGTTCGATG CCGCGGCCGG TCTGCTCGGC
GTGCGCGATT TGATGCAGTA CGAAGGGCAG GCCGCCATGG AACTTGAAGG CCTCGCCGCA
AAACATGGAG CGGTTGAGCC GCTGCCCGGC GGCTATGCCT TGCACGAACA GGGGGCGGTG
CTCGATTTCT CGCCGCTGCT GCTGGCGCTG CTGGGCTGCA AGGACAACGC AGCCTACGGG
GCGGCGCTTT TTCACGCCAC GGTAGCGGCT GGACTGGCCG AATGGAGCAT TCTTGCCGTC
GGCCGCAACA CGGCTTCCAA AATTGCCGTC GCCGGCGGTT GTGCGATGAA TGCCGTGTTG
ATGGATGCGT TACGTCAGCA TCTGGACGTG GCTGGCGTTG GCTTGCTCGA AGCCCGGCAA
GCGCCACCGA ATGATGGCGG TCTGGCCCTG GGCCAGGCGT GGACTGCAAG GCGCCAGATT
GCACTCGGTT GA
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| Protein sequence | MTGRLLRIRG LVQGVGFRPY IWRLANELGL TGWVRNDGAG VIAAVAGEKV ADFVTRLPQE
APRLARIDAI ESEAAVVSAQ GFAILDSESG EVQTAIGPDA AICPECIADI CNPASRRWRY
AFTTCTHCGP RYTISRRIPY DRAQTCLAAF PLCAPCNDEY TTPSDRRFHA ETTCCPDCGP
QLSLLDAGGL PLDGDPIAAC LHLLRAGKIV AIKGLGGFHL ACDARNAVAV AELRERKQRE
EKPLAVMGLN ADALADYARI GKAELALLQS TAAPIVLCAK GATELQGIAP GLAWFGVMLP
ATPLHLLLWH EAAGRPSGSA WLGEPNELLL VMTSANPHGE PLVIANDEAL DRLTGIADAY
LMHNRDIVIR CDDSVLRVTP GGPAFIRRAR GYVPVPISLV DDGPSVLALG GYLKNTICVM
KGREAFLSQH IGSLDNVAAI GFLEETVDHL LGILDVKPEL IAHDLHPDFP STHLALQLAE
KYAIPAVAIG HHQAHLAAIC AEHGVNGPVV GLALDGVGLG PDGGAWGGEL LRLDGANCER
LGHLHRLAMP GGDRAAKEPW RMAVAALHGA GLGYRVGGWI KQYYPTRDPG PLLTMLARHL
RCPQTSSLGR WFDAAAGLLG VRDLMQYEGQ AAMELEGLAA KHGAVEPLPG GYALHEQGAV
LDFSPLLLAL LGCKDNAAYG AALFHATVAA GLAEWSILAV GRNTASKIAV AGGCAMNAVL
MDALRQHLDV AGVGLLEARQ APPNDGGLAL GQAWTARRQI ALG
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