| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3971 |
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| Symbol | |
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| ID | 3567470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4266838 |
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| End bp | 4268550 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637682444 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_287168 |
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| Protein GI | 71909581 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 0.533836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC GTGTCACCAT CGACCCGGTC ACCCGTATTG AGGGCCACCT GCGCGTCGAC
GTCGAAGTGG ATGGCGGCCG CGTCAAGAAG GCCTGGGCAT CGGGCCAGAT GTGGCGGGGC
GTCGAGAACA TCCTGATCGG CCGCGACCCG CGCGACGCCT GGGCGATCAC CCAGCGCATC
TGCGGCGTTT GCACCACCGT GCATGCCATG GCCTCGGTCC GTGCGGTCGA GAACGCGCTG
CAGTTGGAAA TCCCGGTCAA CGCCCAGTAC ATCCGCAACA TGATCATGCT GGCCCATGCC
GTGCATGACC ATATTGTCCA TTTCTATCAC CTCTCGGCAC TCGACTGGGT CGATGTCGTC
TCGGCGCTGA AGGCTGATCC GGCCAAGGCG GCCAGTCTGG CGCAGAGCCT GTCGAACTGG
AGCGGCAACA GTCAGGCCGA GTTCAAGAAG GTGCAGGATC GGCTGAGCGG CTTTGTTGGC
ACCGGACAGC TCGGTATTTT CACCAATGGT TATTGGGGGC ACCCGGCGAT GAAACTGTCG
CCCGAGGTCA ACCTGATGGC CACGGCGCAC TACCTGCAGG CCTTGGAAAT CCAGCGTTAC
GCCAGCAAGA TCGTCGCCGT ACTCGGTTCA AAATCGCCGC ACATCCAGAA TGTCGCGGTC
GGCGGCGTGG CCAATCCGCT GTCGGTCGAT TCGCAATCGG TGCTGACCAT CGAGCGCCTG
CTGGCGATCA AGGAGTGGAT GCTCAAGCTC GAAGACTTCG TCAAGAACGT CTATCTGGTC
GACGTCGGCG CCATCGGCGG CTTCTATGCC GACTGGACCA AGTACGGCAA GGGCATCACC
GACTACCTGT GCGTGCCGGA CATCCCGCTC GATGGCAAGG GCACGACTTT CGCGCTGCCC
GGCGGCTACA TCGAAGGCGG CAAGCTGGAG AGCTACAAGG CGATCACCAG CTTTAACGAC
AAATACTTCA CCGACGGTGT ATCCGAGGCG ATCAAGCATT CCTGGTACAA CTACAGCGAC
GGCAACGACA AGTCGCTGCA CCCGTACAAG GGTGAAACGA CGCCGAACTA CACCGATTTC
CAGGATGATG GAAAGTACTC GTGGCTGAAG TCGCCGACCT TCTATGGCAA GCCGATGCAG
GTCGGCCCAC TGCCGCGCGT GCTGAACATG CTGGCCGCCG GCCACGAACC GACCAAGAAG
TACGCGACCG CGGCGCTCGA TCTGGTGTCT TCGGTGGCCG GCACCAAGGT CGGCGTCGAA
GCGCTGCATT CGACGATCGG CCGCCATGCG GCGCGGGCTG TTGGCTGCGC TGTGCAGGTT
GATGAACTGA TCAACCAGTG GGATCTGCTG CTCGCCAACA TGGCCAAGGG CGACCTCAAG
ACCTTCAATC GCCCGGTCTT CCCAAAGGGC GAACAGATGG GCGTCGGTTT CCACGAAGCG
CCGCGCGGCG TGCTGTCGCA CTGGGTGGTC ATCGATTCCG GCAAGATCAA GAACTACCAG
TGCGTCGTGC CGACCACCTG GAATGCCGCG CCGCGCAACG AGAAGGACCA GCCCGGCGCC
TACGAGGCCT GCCTGATCGA CAACCCGGTG GCCGATCCCG AGAAGCCGCT GGAAGTCCTG
CGCACGGTGC ACTCCTTCGA CCCCTGCCTG GCCTGTGCCG TGCATGTGGT CGATCAGGAG
AACAATCCGG TGGTCACGGT GACGGCTGTT TGA
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| Protein sequence | MNKRVTIDPV TRIEGHLRVD VEVDGGRVKK AWASGQMWRG VENILIGRDP RDAWAITQRI
CGVCTTVHAM ASVRAVENAL QLEIPVNAQY IRNMIMLAHA VHDHIVHFYH LSALDWVDVV
SALKADPAKA ASLAQSLSNW SGNSQAEFKK VQDRLSGFVG TGQLGIFTNG YWGHPAMKLS
PEVNLMATAH YLQALEIQRY ASKIVAVLGS KSPHIQNVAV GGVANPLSVD SQSVLTIERL
LAIKEWMLKL EDFVKNVYLV DVGAIGGFYA DWTKYGKGIT DYLCVPDIPL DGKGTTFALP
GGYIEGGKLE SYKAITSFND KYFTDGVSEA IKHSWYNYSD GNDKSLHPYK GETTPNYTDF
QDDGKYSWLK SPTFYGKPMQ VGPLPRVLNM LAAGHEPTKK YATAALDLVS SVAGTKVGVE
ALHSTIGRHA ARAVGCAVQV DELINQWDLL LANMAKGDLK TFNRPVFPKG EQMGVGFHEA
PRGVLSHWVV IDSGKIKNYQ CVVPTTWNAA PRNEKDQPGA YEACLIDNPV ADPEKPLEVL
RTVHSFDPCL ACAVHVVDQE NNPVVTVTAV
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