| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3966 |
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| Symbol | |
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| ID | 3567465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4264035 |
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| End bp | 4265159 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637682439 |
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| Product | hydrogenase formation HypD protein |
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| Protein accession | YP_287163 |
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| Protein GI | 71909576 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTACA TCGACGAGTT CCGCGACGGC GACGTCGCGC AGACGCTGGC TGCCGCCATT
CGCGCCGAGG CTGACCCGGC GCGCAGCTAC CATTTCATGG AGTTCTGCGG CGGCCACACC
CACGCCATTT CTCGTTACGG CGTGTCCGAC CTGTTGCCGG CCAACGTCAA GATGATTCAC
GGTCCAGGCT GCCCGGTCTG CGTGCTGCCG ATCGGTCGCG TCGATCAGGC GATCCGCCTG
GCGCTCGAAC AGGGCGTCAC GCTGTGCACC TACGGCGACT GCCTGCGCGT GCCGGCCTCC
GATGGTCTAT CGCTGATGAA AGCCAAGGCC AAGGGCGGCG ACATCCGCAT GGTTTATTCG
AGCGCCGATG CCGTGACCTT GGCGCAAAAG AATCCGGACA AGCAGGTCGT TTTCTTCGCC
ATCGGTTTCG AAACGACGAC GCCGCCGACG GCGGTGGCGA TCAAGCACGC TGCCGCGCTG
GGCCTGAAGA ATTTCTCGGT GCTCTGCTGC CATGTGCTGA CGCCATCGGC CATTTCCAGC
ATCCTCGAAT CGCCGGAGGT TCGCCAGTGG GGCACCGTGC CGCTCGACGG CTTCATTGGT
CCAGCCCATG TATCGACCAT CATCGGCAGT CGGCCCTACG AGTTCTTCGC CGAGGAATAC
CGCAAGCCGG TGGTCATTGC CGGCTTCGAA CCGCTCGACG TGATGCAGGC GATCAAGATG
CTGATCCGCC AGGTCAACGA AGGGCGCGCC GAGGTCGAGA ACGAATTCGC CCGCGCCGTC
AGCCGCGACG GCAACCTCAA GGCGCAACAA CTGGTCGCCG AAGTCTTCGA GATGCGCAAG
CATTTCGAAT GGCGCGGCCT GAACATCCTG CCTTACTCGG CGCTGCGCAT TCGCAGCCAG
TTCGCCGAAT TTGATGCCGA AAAGCGTTTT CCGCTCGGTT ATGCATCGGT GCCCGATCAC
AAGGCCTGCG AATGCGGGGC CATCCTGCGC GGCGTCAAGC GGCCGCAGGA CTGCAAGATT
TTCGGCACCG TCTGTACGCC GGAAAACCCG GTCGGTTCCT GCATGGTCAG CTCCGAAGGC
GCCTGTGCCG CTCACTACAC TTATGGACGC TACAAGGATG TCTGA
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| Protein sequence | MKYIDEFRDG DVAQTLAAAI RAEADPARSY HFMEFCGGHT HAISRYGVSD LLPANVKMIH
GPGCPVCVLP IGRVDQAIRL ALEQGVTLCT YGDCLRVPAS DGLSLMKAKA KGGDIRMVYS
SADAVTLAQK NPDKQVVFFA IGFETTTPPT AVAIKHAAAL GLKNFSVLCC HVLTPSAISS
ILESPEVRQW GTVPLDGFIG PAHVSTIIGS RPYEFFAEEY RKPVVIAGFE PLDVMQAIKM
LIRQVNEGRA EVENEFARAV SRDGNLKAQQ LVAEVFEMRK HFEWRGLNIL PYSALRIRSQ
FAEFDAEKRF PLGYASVPDH KACECGAILR GVKRPQDCKI FGTVCTPENP VGSCMVSSEG
ACAAHYTYGR YKDV
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