| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3962 |
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| Symbol | |
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| ID | 3567461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4259451 |
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| End bp | 4260938 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637682435 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_287159 |
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| Protein GI | 71909572 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACC CGGCTTCCAA CCGCAGCCTG CGCAAACTAC CGGCCATCCT TGTCGTCGAT
GACGAAGTGC GGTCGCAGGA AGCCTTGCGC CGCACGCTGG AAGAGGATTT CGATGTGCTG
TGTGCGTCCA GTGCCGACGA GGGCATGGAA ATCCTCGAGC GAGAGCAGGC CTCCGCCGCC
ATCCGCATCG TGCTTTGCGA CCAGCGCATG CCGGGAACGA CCGGCGTCCA GTTCCTGCGC
GAAGTGCGGA CCCGCTGGCC GGATATCGTA CGCATCATCC TGTCCGGCTA TACCGACGCC
GAGGACATCA TTACCGGCGT CAATGAGGCG GGTATCTGGC AATACCTGTT GAAGCCCTGG
CAGCCCGAGC AACTGCTGCT GACCATGCAG CGCGCCGCCG AAGTCTGGCG TCTGCAACAG
GAAAACCAGC GGCTGTCGCT TGATCTGCGC ACGGCCGAGC CGGTGCTGAA AAGGCACGTC
GACAGCAAGC AGGAGAAGGT CAAAAGCAGT TTCGGCCTGG CTGGCTTCAT CCGGGCGCCG
GGCAGCCCGA TCAATGCCGT CTGCGACATG GTCGGGCGCG TTGCGCCTTT TGACCTGTCG
GTGATGGTCA CCGGCGAATC GGGCACCGGC AAGGAAATGA TCGCCCGCGC CATCCACTAC
GAAAGCCGCC GGGCGAGCAA ACCCTTCATC ACCGAAAACT GCGGCGCCCT GCCCGATACG
CTGCTTGAGT CCGAGTTGTT CGGCTACAAG CGCGGCGCCT TTACGGGCGC GGTGGAAGAT
CGTGTCGGCC TGTTCCAGCA GGCCGATGGC GGCACGCTGT TCCTCGACGA AATCGGCGAA
ACCAGCCCGG CCTTCCAGGT CAAGCTGCTG CGCGTGCTGC AGGAAGGCGA GTTTCGCCCG
CTGGGCAGCA ACCGCCCGGT TCATGTCGAT GTCCGGGTCA TTGCCGCGAC CAATCGCGAC
CTGGAAGAAG ACGTGCGCAC CGGACGTTTT CGTGAGGATC TCTACTACCG GCTGGCGACC
ATTTCATTGC ATGTGCCGCC GTTGAGAGAG CGGCCAATGG ATCTGCCGCT ACTGGCGCGT
CGTCTGCTCG ACAGCAGTTG CCAGGCGCTT GGAAAATCGG TTGAGGGCTT CACCAACGAA
GCGCTTGCCT GCATTGCTGC TTACCGCTGG CCAGGCAATG TGCGCGAACT GCAAAACGAA
ATTCTGCGCA TGGTCGCCTT GTCCACCGCG CCGCTGCTTG GTGCCGACCT GCTGTCGCCA
CGGGTGTTGC GCACACCGGT GGGCGAAACT CAGGAAAATG ATCTGGCCTG GGCTTCCGGC
TTGAGCGGTG GCCTCAAGGA GCGCATGGAT CAGCTGGAAA TGCACGTCCT CAAGGAGGCG
ATGATCCGCC ACCGCTGGAA CAAATCGCGG GCAGCCCGGG AGTTGGGGCT GTCGCGTGTC
GGCCTGCGGG CCAAGCTGGT TCGCCACGGG CTGGAGCAGG CCGAATGA
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| Protein sequence | MSHPASNRSL RKLPAILVVD DEVRSQEALR RTLEEDFDVL CASSADEGME ILEREQASAA
IRIVLCDQRM PGTTGVQFLR EVRTRWPDIV RIILSGYTDA EDIITGVNEA GIWQYLLKPW
QPEQLLLTMQ RAAEVWRLQQ ENQRLSLDLR TAEPVLKRHV DSKQEKVKSS FGLAGFIRAP
GSPINAVCDM VGRVAPFDLS VMVTGESGTG KEMIARAIHY ESRRASKPFI TENCGALPDT
LLESELFGYK RGAFTGAVED RVGLFQQADG GTLFLDEIGE TSPAFQVKLL RVLQEGEFRP
LGSNRPVHVD VRVIAATNRD LEEDVRTGRF REDLYYRLAT ISLHVPPLRE RPMDLPLLAR
RLLDSSCQAL GKSVEGFTNE ALACIAAYRW PGNVRELQNE ILRMVALSTA PLLGADLLSP
RVLRTPVGET QENDLAWASG LSGGLKERMD QLEMHVLKEA MIRHRWNKSR AARELGLSRV
GLRAKLVRHG LEQAE
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