Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3943 |
Symbol | |
ID | 3567481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4238142 |
End bp | 4240418 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637682417 |
Product | malic enzyme |
Protein accession | YP_287141 |
Protein GI | 71909554 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00128716 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAAGG ATCTGCGCGA AGCCGCTCTC GAATACCATC GCTGGCCCAC CCCGGGCAAG ATTTCCGTCC GCCCGACCAA GGGCCTGACC AACCAGCGCG ATCTGGCGCT GGCCTACTCT CCGGGTGTTG CCGCCGCCTG CGATGCGATC GTCGAAGATC CGGCCACTGC TGCCTGGTAT ACCTCGCGCG CCAATCTGGT GGGGGTTGTG ACCAACGGTA CTGCCGTGCT TGGCCTTGGC AATATCGGCC CGCTCGCTTC CAAGCCGGTC ATGGAAGGCA AAGGCTGCCT GTTCAAGAAA TTTGCCGGTA TTGACGTGTT CGACATCGAA CTGGCCGAGA ACGATCCGGA CAAGCTGATC GACATGATCG CCGCCCTCGA GCCGACGCTC GGCGGTATCA ACCTTGAAGA CATCAAGGCG CCGGAATGCT TCTACATCGA AGAGAAGCTC AAGGCGCGGA TGAACATCCC GGTCTTCCAT GACGACCAGC ACGGCACCGC GATCATTTCC GGCGCCGCCA TGCTCAACGG CCTGAAGGTC GTCGGCAAGA AGATCGACCA GGTCAAGGTC GTCGTTTCCG GTGCCGGTGC GGCCGCCATC TCCTGCGTCA ACCTGTGGTG TGAGCTCGGC GTCAAGCGCG AGAACATCAC CATTTGTGAC TCCAAGGGCG TCATCTACGT TGGTCGCCCG GGCGGCATGG ACGAGACCAA GGCCCGCTAC GCCCAGAATA CCGACAAGCG TACCCTTGGC GAGGCGCTGG TTGGTGCCGA TATCTTCCTC GGCCTGTCCG CTGCCGGCGT CGTCAAGCAG GACATGGTCA AGGCCATGGC CGACAAGCCG ATGGTCTTTG CGCTGGCCAA CCCGACCCCG GAAATCATGC CGGAACTGGT CAAGGAAGTT CGCCCGGACG CCATTATCGC CACCGGCCGT TCTGACTACG TAAACCAGGT CAATAACGTT CTGTGCTTCC CGTTCATCTT CCGCGGCGCG CTCGATGTCG GCGCCACGCG TATTACCGAA GAAATGAAGA TGGCTTCCGT CCGTGCCATC GCTGAACTGG CCGAAGCTGA AGTGACTGAC GAAGTCGCCA TGGCCTATCC GGGCGCTGAT CTGTCTTTCG GCCCGGAATA CCTGATCCCC AAGCCTTTCG ACCCGCGTCT GATCGTCAAG ATCGCGCCGG CCGTCGCTCA GGCCGCCATG GATTCCGGTG TCGCAACCCG TCCGATCACC GACTGGGCTG CCTATCGCGC CAAGTTGTCT GAATTCGTTT ATCACACCGG TGTCGGCATG CGGGCCATCT TCCAGGCCGC CCGTCAGGCC AAGGGCAAGC GCATCATTTT CGCCGAAGGT GAAGATGAAC GCGTCCTGCG CGCTGCCCAG GTGGTGATCG AAGAGAAGTT CGCGCGTCCG ATCCTGATCG GTCGTCCGGA AGTGATCGCG CACCGCCTCG AAAAGGCCAA GCTGCGCATC CAGCCGGGTG TCGACTTCGA TGTCGTCAAT CCGGAGTCCG ACGAGCGCTA TCGCGAATGC TGGACCGCCT ACCACAAGGC CATGGCGCGT CAGGGCATTA CCCCGGCCAT CGCCAAGGAA GCCATGCGCC GCAAGCCGAC CGTGATCGGC GCCATGCTGC TCAAGCTCGG CTACGCCGAC GGCATGATCT GCGGCATGAC TGGACAATAT AGCCACCATC TCGGCGTAAT CAGCCAGATC ATCGGCAAGC GCGCCGGTGT CAGCACGCTG GCAGCAATGA ACTACCTGAT GCTGCCGGGC CGCTCGCTGT TTATCTGCGA TACGCATGTG AACGAAAATC CGAATGCCCA GGAAATTGCC GAAATGACGC TGATGGCGGC CGAACAGGTC AAGCGTTTCG GTAGCCATCC GAAGGTGGCG CTGCTGTCGC ATTCCAATTT CGGTTCCGCC AATTCCGAAT CGGCACGCAA GATGAGCATT GCCGCTGGTC TGGTCTCCGC CATGTCGGCC GGTGAGCTGG AAGTGGATGG CGAAATGCAT GGTGACTCGG CGCTGAATGA AGATCTGCGC CGTGAAGCGA ATCCGGATTC ACCGCTCAAG GGTGAAGCCA ATCTGCTGGT CATGCCGAAC ATCGATGCCG CCAATATCTC CTACAACCTG ATCAAGATGA CCGGTGGCGA AGGCGTGACC ATCGGCCCCA TCCTGCTCGG TGCGGCCCGT CCGGCGCATG TGCTGACCTC GACGGCCACC GTCCGTCGTC TGGTCAATAT GACCGCTCTG GCAGTTGTGG AGTCGATGGA GCGCTAA
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Protein sequence | MEKDLREAAL EYHRWPTPGK ISVRPTKGLT NQRDLALAYS PGVAAACDAI VEDPATAAWY TSRANLVGVV TNGTAVLGLG NIGPLASKPV MEGKGCLFKK FAGIDVFDIE LAENDPDKLI DMIAALEPTL GGINLEDIKA PECFYIEEKL KARMNIPVFH DDQHGTAIIS GAAMLNGLKV VGKKIDQVKV VVSGAGAAAI SCVNLWCELG VKRENITICD SKGVIYVGRP GGMDETKARY AQNTDKRTLG EALVGADIFL GLSAAGVVKQ DMVKAMADKP MVFALANPTP EIMPELVKEV RPDAIIATGR SDYVNQVNNV LCFPFIFRGA LDVGATRITE EMKMASVRAI AELAEAEVTD EVAMAYPGAD LSFGPEYLIP KPFDPRLIVK IAPAVAQAAM DSGVATRPIT DWAAYRAKLS EFVYHTGVGM RAIFQAARQA KGKRIIFAEG EDERVLRAAQ VVIEEKFARP ILIGRPEVIA HRLEKAKLRI QPGVDFDVVN PESDERYREC WTAYHKAMAR QGITPAIAKE AMRRKPTVIG AMLLKLGYAD GMICGMTGQY SHHLGVISQI IGKRAGVSTL AAMNYLMLPG RSLFICDTHV NENPNAQEIA EMTLMAAEQV KRFGSHPKVA LLSHSNFGSA NSESARKMSI AAGLVSAMSA GELEVDGEMH GDSALNEDLR REANPDSPLK GEANLLVMPN IDAANISYNL IKMTGGEGVT IGPILLGAAR PAHVLTSTAT VRRLVNMTAL AVVESMER
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