| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3907 |
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| Symbol | |
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| ID | 3567695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4202551 |
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| End bp | 4203375 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637682381 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_287105 |
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| Protein GI | 71909518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT TGTACTGCGT CTTCGGCAAT CCGATTGCCC ATTCCAAATC GCCAGCCATT
CATGCTGCCT TCGCGGTCCA AACGGCGCAG GATTTGCGCT ATGAAGCGCG TCTGGCTGCG
CTTGATGGCT TCGGCCTGGC TATTGCCGAA TTCGTTGCGG TGGGCGGCAA GGGGGCGAAT
GTCACCGTGC CATTCAAGGA AGAAGCCTAT CGTCTGGCGA CGCGCCTGTC CGACCGTGCG
GCGCGCGCCG GGGCGGTCAA TACGCTGGTG TTCGATGGTC CTGAAGTTTT TGGCGACAAC
ACGGATGGTG CTGGGCTGGT TCGTGACATC ACGAACAACC TCGGTTTTTC GCTGGTCGGC
AAGCGCATTT TGTTGCTCGG TGCCGGTGGC GCTTCACGCG GGGTCATCGC CCCGTTGCTG
GCTGAAAAGC CGGCCTCACT GATCATCGCC AACCGCAGCG CCGACAAGGC CGTTGCATTG
GCACAGGCAT TTGCTGATAT GGCGCCGCTG GGGGGCGGAA GTTTTGCAGA AACTGCTGGT
AAAAGCTTCG ATCTGGTAAT TAACGCTACC TCCGCCAGCC TTTCTGGTGC AAGTCTGCCC
CTGCCCCCGG GGATTTTTGC ACCGGGTAGC CTGGCTTACG ACATGATGTA TGGCAAAGGT
GAAACACCAT TCCTGACGCT GGCCCGACAG CAGGGGGCGG CACGTTGTGC CGACGGTCTT
GGCATGCTGG TTGAACAGGC GGCGGAAGCC TTCTTCGTCT GGCGTGGCAT TCGCCCGGGT
ACTGCGCAGG TGCTGGCTGA GCTGAGAGCC AAGCTGGTCG CATGA
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| Protein sequence | MSDLYCVFGN PIAHSKSPAI HAAFAVQTAQ DLRYEARLAA LDGFGLAIAE FVAVGGKGAN
VTVPFKEEAY RLATRLSDRA ARAGAVNTLV FDGPEVFGDN TDGAGLVRDI TNNLGFSLVG
KRILLLGAGG ASRGVIAPLL AEKPASLIIA NRSADKAVAL AQAFADMAPL GGGSFAETAG
KSFDLVINAT SASLSGASLP LPPGIFAPGS LAYDMMYGKG ETPFLTLARQ QGAARCADGL
GMLVEQAAEA FFVWRGIRPG TAQVLAELRA KLVA
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