Gene Daro_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3893 
Symbol 
ID3567738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4183673 
End bp4184233 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID637682367 
Producthypothetical protein 
Protein accessionYP_287091 
Protein GI71909504 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG TCAATCTGAC CGACAACTTT CTCATCGCCA TGCCGACGCT GGAAGATCCG 
TACTTTTCCA ACGCGCTGGT CTATATCTGC GAACACAATG AGAACGGCGC CTTGGGGATT
ATCGTCAATC GCCCGATCGA CATGAATCTG GCCAGTTTGC TTGAAAAAAT CGACATCAAG
CTGGAGGCCG AGAATCTCGC CGATATGCCC GTCTATTTTG GTGGGCCGGT TCAGCTGGAT
CGCGGCTTTG TGCTTCATCG TCCAATCGGC CAATGGCAGT CCACGCTGGC CATCAACAGC
GATGTCGGCC TGACCAGTTC TCGTGATGTA CTGAGTTCAG TCGGGAGTGC CGGCTTGCCG
GCGGAAATCC TCGTTACCCT TGGCTATGCC GGCTGGGATG CCGGACAGCT GGAAGAGGAA
CTGGCCCAGA ACTCCTGGCT GACGGTGCCA GCCAAGGCCA GCATCCTGTT CGATCTGCCA
CCGGAGGAGC GTCTGCCTGC CGCCATGCAG AAACTCGGTA TCAGTTTTAC CCAGCTTTCC
GACGTGGCTG GACACGCCTG A
 
Protein sequence
MDNVNLTDNF LIAMPTLEDP YFSNALVYIC EHNENGALGI IVNRPIDMNL ASLLEKIDIK 
LEAENLADMP VYFGGPVQLD RGFVLHRPIG QWQSTLAINS DVGLTSSRDV LSSVGSAGLP
AEILVTLGYA GWDAGQLEEE LAQNSWLTVP AKASILFDLP PEERLPAAMQ KLGISFTQLS
DVAGHA