Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3885 |
Symbol | |
ID | 3567730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 4178463 |
End bp | 4179275 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637682359 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_287083 |
Protein GI | 71909496 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 0.0846425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTG TTTTCCTTGG CGGCGGCAAC ATGGCCAACG CGCTGATCGG CGGTATGGTG AAGCAAGGCT TTTCTGCAGC GGATATCCAC GTGATCGACC CGGGTGCAGA GGCGCTGGCC AAACTGGCCA GCGCTTATGG CGTCAACTGC CACGCCAGCG CCGATGCAGC ACCAGCTTCA CCCGATGTGC TTATTCTGGC GGTCAAGCCG CAGCAGATGA AGGACGCTGT CGCACCGCTC GTCGGCAAGC TGGGCAAGGC GCTGATCATC AGCATCGCCG CCGGCCTCGA CATGACGGCA CTATCACGCT GGCTGGGCGG CCATCGCCAG ATTGTTCGCT GCATGCCCAA CACGCCAGCC CTGATCGGCG CTGGTATAAC CGGGCTATGC GCCCTGCCGG AAGTAAGCAC TGACCAACGC GCTGTAGCCG ACCGCGTGCT GCGTGCCGTC GGCACCACCG TCTGGATAGA CGACGAAGCA AAGATTGATG GTGTGACCGC CATCTCCGGC AGTGGCCCGG CCTACGTTTT TCTGTTCATC GAAGCGCTGC AACAGGCTGC TGCCGATCTC GGTTTCACGC CGGAGCAGGG CCGCCAGCTG GCCATCGAAA CTGTCCAGGG GGCAGCCGCG CTGGCTGCGC AATCGACCGA GCCGGCTTCC ATCCTGCGTG AACGGGTGAC CTCCAAAGGA GGCACGACCG CTGCAGCCCT GAACGTCATG GCCGAACGCG GCGTAAAAGA AGGCATTGTT GCCGGCTGCA TGGCGGCCGC CGCGCGTGGC CAGGAACTCG GCAAGATCCT TGGGGCTGAC TGA
|
Protein sequence | MKIVFLGGGN MANALIGGMV KQGFSAADIH VIDPGAEALA KLASAYGVNC HASADAAPAS PDVLILAVKP QQMKDAVAPL VGKLGKALII SIAAGLDMTA LSRWLGGHRQ IVRCMPNTPA LIGAGITGLC ALPEVSTDQR AVADRVLRAV GTTVWIDDEA KIDGVTAISG SGPAYVFLFI EALQQAAADL GFTPEQGRQL AIETVQGAAA LAAQSTEPAS ILRERVTSKG GTTAAALNVM AERGVKEGIV AGCMAAAARG QELGKILGAD
|
| |