Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3863 |
Symbol | |
ID | 3567747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4154257 |
End bp | 4155039 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637682337 |
Product | short chain dehydrogenase |
Protein accession | YP_287061 |
Protein GI | 71909474 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 0.331172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGCTCA GGGTCTTCAT CACAGGCGCC TCGTCGGGTA TCGGCGAGGC GCTTGCCGTT TACTATGCCG CTCAAGGTGC TCGTCTTGGC CTGGTGGCGC GACGCAACGA GTTTCTTGAG GCTTTGAATC AGCGTCTTGG CGGGCAGCAT GCCTGCTATA CGCTGGATGT CAGCGATGCG CCGGCGTTGC ATGCGGCGGC CGCCGATTTC CTGGCTCGTT TTGGCGCGCC GGACATCATC ATTGCCAATG CGGGGGTTTC GGCCGGTACG TTGACCGAAT GCGAGGAGGA TCTGGCGGTC TTCCGGCGCG TCATGGACAC CAACGTTTTC GGCATGGCGG CGACTTTCGC GCCCTTCATT CCGGCCATGA AGGCAGCCGC TAGCGGCGGC AGGAAAACGC AGCGGCTGGT CGGTATCGCC TCGGTCGCCG GTATCCGTGG GTTGCCGGGG GCAGAGGCCT ATTCGGCCTC AAAGGCAGCG GCGATCACCT ATCTGGAAAG CCTGCGTCTT GAAATGCGGC CGTACGGCAT CAAGGTGGTG ACCATCGCGC CGGGCTACAT CGAAACGCCG ATGACGGCGG TCAATCCCTA CCAAATGCCG TTCTTGTTGC CAGTCGACCA AGCAGCCGAG CGTTTTGCCG CCACCATCGA GCGTGGCACG AGCTATGCCG TGATCCCGTG GCAGATGGGC GTGGTGGCCA AATTGTTGCG GGTTTTGCCC AACTGGCTTT ACGACCGCTT ATTCACCAGC GCACCGAGAA AACCGCGCGG CTTGCTAAAA TAG
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Protein sequence | MTLRVFITGA SSGIGEALAV YYAAQGARLG LVARRNEFLE ALNQRLGGQH ACYTLDVSDA PALHAAAADF LARFGAPDII IANAGVSAGT LTECEEDLAV FRRVMDTNVF GMAATFAPFI PAMKAAASGG RKTQRLVGIA SVAGIRGLPG AEAYSASKAA AITYLESLRL EMRPYGIKVV TIAPGYIETP MTAVNPYQMP FLLPVDQAAE RFAATIERGT SYAVIPWQMG VVAKLLRVLP NWLYDRLFTS APRKPRGLLK
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