Gene Daro_3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3859 
Symbol 
ID3568030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4151842 
End bp4152462 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content57% 
IMG OID637682333 
Productcytochrome c5 
Protein accessionYP_287057 
Protein GI71909470 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.00000764521 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGTA GCAAAAGTAT TTCCATGGGA TTGCTGGCGG CATTGGCCGT ACTGCCTCTC 
TGTATCACGC CAGCGCTGGC ATCCGATCGC TCCGGCAAAG AAGTGGTTGA TACCGTCTGT
GCAGCGTGCC ACTTGTCCGG CAAGGACGGT GCTCCAAAAA TTGACGATCG TGCCGCCTGG
TCCCAGCGTG CATCCAAGGG TCTGGACAAG CTGACGCAGA ATGCCATTAC CGGGGTTCGC
AACATGCCGG CCCATGGTGG TCAGGCAGCG CTTTCCGATG TCGAGATGAG TCGTGCCGTG
GGCTATATGG TGAGTGCCGG TCATTCAGCC GATACGAACA AGGTTTACAG TTCAGCGAAG
TCACGGAGCG GTGATCAGGT GGTTCAGGAG CGTTGCCAGG AGTGCCACGC CACCGGGAAG
AACGGCGCGC CGAAACTGGG CGATATGAAT GACTGGAAGC CGCGTCTGAA AAATGGGGTT
GATCCTCTGA TCAAGTCAGC CATCAATGGC CATAACTCGA TGCCGGCTCG CGGTGGCCTG
GCCAATTTGA GCGATGCCGA AATGAAGGCC GCTGTTGAAT TCATGGTCAG CAAGACTGGC
GGTCACGTCG GTACCAAATA G
 
Protein sequence
MKCSKSISMG LLAALAVLPL CITPALASDR SGKEVVDTVC AACHLSGKDG APKIDDRAAW 
SQRASKGLDK LTQNAITGVR NMPAHGGQAA LSDVEMSRAV GYMVSAGHSA DTNKVYSSAK
SRSGDQVVQE RCQECHATGK NGAPKLGDMN DWKPRLKNGV DPLIKSAING HNSMPARGGL
ANLSDAEMKA AVEFMVSKTG GHVGTK