Gene Daro_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3780 
Symbol 
ID3567513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4067806 
End bp4067997 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content60% 
IMG OID637682255 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_286979 
Protein GI71909392 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.00700044 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000166532 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCATTCG CACAAATCTA CCTGATTGAA GGTCGGACCG ACGAGCAAAA GAAGCTGTTG 
ATCGAAAAGG TCAGCGCGGC CATGTCCGAG GCGCTGGGTG CTCCGCTGGA GAACACCCGG
GTCTGGATCC AGGACGTACC CAAGGCCCAG TGGGGTATCG GCGGCAAGAC CGCAAAGGAC
TTGGGGCGCT AG
 
Protein sequence
MPFAQIYLIE GRTDEQKKLL IEKVSAAMSE ALGAPLENTR VWIQDVPKAQ WGIGGKTAKD 
LGR