Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3775 |
Symbol | |
ID | 3567508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 4059604 |
End bp | 4060680 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637682250 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_286974 |
Protein GI | 71909387 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.00289706 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00333636 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATCT GTGTAATTCC CGGGGACGGC ATCGGTGTCG AAATTTGTGC CGAGGCCGTC AGGGTGATCG ACGCCCTGAA GGATATCCAT GGCCTGAAAA TCGAATATGA GTACGGGCTG TTGGGTGGCG CCGCCTACGA TCAGACGGGG CGCCCCTTGC CGGTTGAAAC CTTGAGGCTG GCTGACGAAG CCAACGCCAT CCTGCTCGGT GCCGTCGGCG GCCCGAAGTG GGACAAGCTG CCGGCCGAGT CGCGCCCCGA ACGCGGCTTG CTGGGGATCA GGAAATATCT CGGGCTCAAT GCCAATCTGC GTCCGATCAA GGTCTATCCG GAACTGGCCA ATGCCTCGAC GCTGCGCCCG GAGGTGGTCA GCGGACTCGA CATGATGATC GTCCGGGAAC TGACGGGCGA TATCTATTTT GGCCAGCCGC GCGGGATACG GACCTCCGGG TTCGAACGCG TCGGTTACAA CACCATGGAG TACTCCGAAT CCGAGATCGC ACTGATCGCC GAAATGGCGT TCAGGATTGC CCGCCAACGG AGTGGCAAGG TGATGTCCGT CGACAAGATG AATGTGCTGG AGTGCATGCA GCTCTGGCGC GACGTGGTGA CCAAGGTCGG CGAACGTTTC CCGGATGTCA CGCTCGATCA CATGCTGGTC GACAACGCGG CCATGCAACT GGTCAAGAAC CCGAAGCAGT TTGATGTCCT GCTCACCGGC AACATGTTTG GTGACATTCT CTCGGACGAA GCCGCGATGC TGACCGGTTC GATCGGCATG CTGCCTTCGG CCTCGCTCAA TGTCGAGGAC AAAGGGATGT ATGAGCCTTG CCATGGTTCA GCGCCGGACA TTGCAGGGCA GGGCGTTGCC AATCCCTTGG GCATGATTCT GTCGGCAGCG ATGATGTTCC GCTATAGCTT GGGCCGGCCG GACATGGCCG ATGCGATCGA ATCAGCGGTC CAGACGGTAT TGACGAATGG CGCGCGGACC AGGGATATTT TCCAGGCCGG TGACCGTTTG GTTTCCACTT CCGAAATGGG TGGGCTGGTC GAGGCGGCGC TAAGGCGAAT CAGCTAG
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Protein sequence | MKICVIPGDG IGVEICAEAV RVIDALKDIH GLKIEYEYGL LGGAAYDQTG RPLPVETLRL ADEANAILLG AVGGPKWDKL PAESRPERGL LGIRKYLGLN ANLRPIKVYP ELANASTLRP EVVSGLDMMI VRELTGDIYF GQPRGIRTSG FERVGYNTME YSESEIALIA EMAFRIARQR SGKVMSVDKM NVLECMQLWR DVVTKVGERF PDVTLDHMLV DNAAMQLVKN PKQFDVLLTG NMFGDILSDE AAMLTGSIGM LPSASLNVED KGMYEPCHGS APDIAGQGVA NPLGMILSAA MMFRYSLGRP DMADAIESAV QTVLTNGART RDIFQAGDRL VSTSEMGGLV EAALRRIS
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