| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3764 |
|---|
| Symbol | |
|---|
| ID | 3567497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 4049674 |
|---|
| End bp | 4050843 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637682239 |
|---|
| Product | cation efflux protein |
|---|
| Protein accession | YP_286963 |
|---|
| Protein GI | 71909376 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0837533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAAG AGCAACTCCA CGTGACAACA TCCCCGGCCG ATCGGGCGGT CGAGGCGCAA
AAGGCAACGT GGGTCAGTGT TGCGGTCAAT CTGGTGATGA CGGTTATTCA GCTTATTGTC
GGCTGGCTGG CGCATTCACA GTCATTGGTG GCGCATGGCC TGCACTCGTT TTCCGATTTG
CTGTCCGATT TTCTCGTCAT CTACGCCAGC CGGCAGAGTG CCCATCCCGC CGATGAGGCC
CACCCTTACG GCCACGCGCG CATGGAAACT GCCGCCACGC TGGTGCTCGG AGCTTCGCTG
ACGCTGATCG GTGGCGGCAT CCTGTGGGAG TCGGGCATGC GTCTTCAGCA TATCGAGGCG
TTGCCGACCG TCGAACTTTC AGCCCTCTGG GTGGCGATCG CCACGGTGGT ATCCAAAGAG
GCCTTGTACC GCTACCTGAT CCGGGTGGCC GAGCGCTTGC GTTCTCAATT GCTGATCGCC
AACGCGCTGC ATACCCGTGC CGATGCGGCG TCAGCGCTGG TTGTCGTGGT CGGCATCGGC
GGCGCCTTGC TCGGCTGGTC ATTCCTCGAT CTGCTGGCTG CGGCCCTGAT GGGCTTCATG
ATCCTGCGCA TGGGTGCCGG TCTGGCCTGG GGCGCGATCA AGGAGCTGAT CGATACCGGG
CTGGATGAGT CACAGGTCGA GGCTATTCGT GCGACGCTGC GCGAAACGCC CGGCGTGCGC
GGCTTGCACC AGCTAAGAAC CCGACGCATG GCGCATCAGG CACTGGTCGA CACCCACGTT
CAGGTCGATT CGCGGATCAG CGTTTCGGAA GGTCACCGCA TCGCCGAGTC GGCACGGGCC
CGGGTGCTGC GCGAACATCC GGAGGTGCTC GATGTGCTGG TCCATATTGA TCCGGAGGAT
GATATGGACC CGGCGGTTTT TTCTGCCCGC CTGCCGGGCC GGGAGGCCTT GCTGGCCGAG
CTCAAGCCAT TGCTGGCCGG ATTGCCGAAG CCGGAAAAGG TGGTTTTGCA TTACTTGAAC
GGCCAGGTCG AACTTGAGGT CTTCCTGAAC CACGTCTTTT TCGAAAACGG CGAAGCACTA
AAGCGAGCCG AGGAAGCCTT GGTCGAACAG CTAAAAGCCC ATGCCGCAGT GCGTTGCATC
TCTTTGAATT GCCTGGTTGC ACCAAAATAG
|
|---|
| Protein sequence | MVQEQLHVTT SPADRAVEAQ KATWVSVAVN LVMTVIQLIV GWLAHSQSLV AHGLHSFSDL
LSDFLVIYAS RQSAHPADEA HPYGHARMET AATLVLGASL TLIGGGILWE SGMRLQHIEA
LPTVELSALW VAIATVVSKE ALYRYLIRVA ERLRSQLLIA NALHTRADAA SALVVVVGIG
GALLGWSFLD LLAAALMGFM ILRMGAGLAW GAIKELIDTG LDESQVEAIR ATLRETPGVR
GLHQLRTRRM AHQALVDTHV QVDSRISVSE GHRIAESARA RVLREHPEVL DVLVHIDPED
DMDPAVFSAR LPGREALLAE LKPLLAGLPK PEKVVLHYLN GQVELEVFLN HVFFENGEAL
KRAEEALVEQ LKAHAAVRCI SLNCLVAPK
|
|---|
| |