Gene Daro_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3728 
Symbol 
ID3567362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp4007294 
End bp4007866 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID637682201 
ProductOuter membrane lipoprotein LolB 
Protein accessionYP_286927 
Protein GI71909340 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID[TIGR00548] outer membrane lipoprotein LolB 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.19888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGACTCC GCTTTTCCCT GCTGCTCACG GTCAGCCTAC TGGCCGGTTG CGCCAGTGCG 
CCCCCCGCCA CGCTGCAGCA CCGCGACAAT ATCCGCGATT TTTCTCTGGA AGGCCGATTC
GCCCTGCGTG TGGCCATGCC CGACCAGGCG CCGCAAAGCT CAGGCGGCCG CCTGAGTTGG
ACCCACCGGA ACCGCAGCGA CCGCGTCCTG CTGTCCAGCC CCCTCGGCTA CGGCCTGGCT
GAAATTGAAA CCACGCCCGA ACTGTCCCGA CTACGAACCG CCGAAGGCAA GCAAAGCGAA
TCGACCGATC CCGATACCCT GATTGAAGAA GTCACCGGCC AGCGTCTGCC GGTCACTCGC
ATGCCGGCCT GGCTGCTTGG GCGCTCCGGA GGCAAGGCGC AAATCTTTAA CGACCCGATT
GGTCGCCCTG GAAAATTGCT GGAAGACGGT TGGCAGGTCG ACTACACCTA TGATGATGAA
GCGCCAGCCG CCCTGCCCAG CCGACTGAAT ATTTCCCGCG ACGGCGAAAT CGAACTGAAA
TTGCGCATCG AAGAGTGGAA AGAAACACCT TGA
 
Protein sequence
MRLRFSLLLT VSLLAGCASA PPATLQHRDN IRDFSLEGRF ALRVAMPDQA PQSSGGRLSW 
THRNRSDRVL LSSPLGYGLA EIETTPELSR LRTAEGKQSE STDPDTLIEE VTGQRLPVTR
MPAWLLGRSG GKAQIFNDPI GRPGKLLEDG WQVDYTYDDE APAALPSRLN ISRDGEIELK
LRIEEWKETP