| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3599 |
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| Symbol | |
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| ID | 3568263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3856000 |
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| End bp | 3859635 |
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| Gene Length | 3636 bp |
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| Protein Length | 1211 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637682072 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_286798 |
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| Protein GI | 71909211 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000373823 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCCCC CGGTCATTGA CCGCAACAAT CCCTGGCCTT GGCTGGACCC GTTCACCGAA
AAGGCTGAAG CCTTCTTCAA TGGACGGGAT GACGATAGTG CTGCACTCCA GCGTTGTGTC
CTGGCGGGAG TGGCGACGGT GCTCTTTGGC AAGTCCGGAC TCGGCAAGAC CTCACTGCTC
CAGGCCGGGC TTTTCCCCCG GCTGCGCAAG TCTGGCTTGC TGCCCGTGCT GGTCCGCCTC
GAACATGGTA GCGCTTCGCC AACGGCCGCA GCCCAGATTC GGACCTGCCT GCACAAGGAA
TGTACGGCTT ACGGCCTGAC GATGCCGGGC AACCCACAAT TTGCGCCGCA ACTGGAAAAG
CCAGAAGACC GCTTGTGGCT CGACTTGCAT ACCAATCCGG TCGGTTTGCG CGATGCCCAT
GGTCAAACCT GGCAGGTGGT TTTCGTTCTC GACCAGTTTG AGGAAATATT TACCCTCGGC
GGCCAGGATA GCGAGCGCCA GAGGCTTGAT TTTGGCGCAC TCGGTGACCT CGTCGAAAAC
CGCATCCCCC GCGCGCTGGA AAACGCGATC AGTGTCGATG AGGATCTCCT CGATGAATTA
CGTCTGGACG TTCAGCCCTA CCGCGTCGTC TTCTCGCTGC GCGAGGACTA TCTGCCGAAC
CTGGAGCGCT GGTGCGACCG GATTCCCCGC CTCGGCCCCA ATCGCTACCG CTTGCTGCCC
ATGCAGGAAG CTCAGGCGCT TGACGCCATA CGACTGACTG GCGGTGATCT GGTCTCGCCG
CAAGACGCCG ATCGCATCGT ACGATTCGTC TCCAGCCAGC AGGAAGGCCC GGCCGTTGGC
ATGGCGAGCG GCGAATCGGC CGAGGTCAGT ATCGAGCCGG CACTCCTCAG CCTGTTGTGT
TCCGGCCTCA ACCTCGAACG CCAGAAGGCA GGGGCTGCAC ACCTCGACGC CTCCAACCTG
GAACAGAGTG GCGGTCGAAT CATGGAGCGG TTTTACGATG ACGCGACTCT GGATGTTGCA
CCGGCGGCCA TCGCTTTTGT CGAAGACGAG TTGATCACTC CGGACGGTGT TCGTCTGTTC
TATCCACTCA AGTCCATCCT GCAGAATCCC GGTATCACCA AGGCGGATAT CGACACCCTG
ATCGAGCGCC GGCTGCTGCG TCGCCAGCCA TTCACCGAAG GCGACCGCAT CGAGCTCGTC
CATGACCGCC TGGCCGCCGT CGCTCGCCAA CGGCGCCGGA ATCGGGAAAG CGTGGCCGCG
CAGCAGCGTC GGCTGGACGA GGCGCGCCGT GAGGCGGCCG CCAAGGAAGC GAATGTTCGT
GCCGATCTCG AAAGCAAGGC GCGGGAGAGC GAAACCCGCG CCCGCCTGCG CGCCGAAAAA
GATGCTTCAT CCCAAAGGCG CTTGCAAGGA ATACTGAAGT TCGTCGTTGC CGCCCTGGTT
GTCCTTCTCT GTTTGGCCGG GGCGTCCGCC TGGTTCGCCC GCGAGCAGTC GGCATTGGCA
CGGGCCGCTG AAGGCAAGGC CAAAAGGTCG GCGGAGGAAG CCAGTATCCG CCGCCTGGTT
GCCGAAGGGC AGGCGATGAC GACCGGCGCG CAGAGTGGCG GCTCCATCCT CGGCATACTG
CAGTTGCTGG CGGCTCACCG CCTGTCCGAT GAGGCCTATC CGCAAGCCTC ACCGGGGGCT
CTGGGCGCGT TGCGGGCCGA ATTCATGCGC AGTGCCAGAT TGCTCCACCT GAGCGAAAGT
GACGAAGCCA TCACCACCCT GGACTTGAGT CCGGACGGCC TGCGTATTGT CACGGGGAGC
CGCAACGGTA GCCTGCAGCT ATGGGAGGCC GCATCGGGAG CCCCTATCGG CAAGCCGCTG
ATCGGGCACT CGTCGTACGT CAACAGTGTC GCCTTCAGCC CGGACGGCAA GGCGATCGTT
TCGGCCAGTC GGGACCACAC CCTGCGCCTG TGGGAGGCCG GCACGGGTAA TCCGCTTGGC
AAGCCGCTGC AAAGTGACAG CGCGGTCTGT AGTGTCGCCT TCAGCCCCCT CGGACAGCGC
ATCGTCGCGG GTGGCCTGGA CGGTAACTTG CGCCTGTGGG ATGCCGCTAC CGGGCAAATG
CTGGGTGAGC CGCTCAAGGG GCATAGCCAA CGGGTTTGCG CCGTCGCCTT CAGCCCGGAT
GGTCAGCACA TTGTTTCCGG CGGAGATGAC AAGACGCTGC GCTTGTGGAA TGTCAGCTCC
GGCCAACCTT CCGGTGAAGT GTTGAAGGGG CACACGGAAG CGGTATATAG CGTCGCCTAT
AGCCCGAATG GCCTGCGTAT CGTTTCAGGC AGCAGCGACG CCACCCTGCG TCTATGGGAT
GCCAGGACAG GAAAACCTAT CGGCGACCCA CTCAAGCGAC ATCGCAAGGC CATTCTCGGG
GTCGCCTTCA GCCCGGATGG GCGCTACATC GTTTCAGGGA GTGGCGACTA CACGGTTCGC
CTGTGGGAAA CCGAAACCCA GAAGCCGGCC GGCGACAGCC TGCGTGGACA TACGGATGAA
ATCACCGGCG TTCTCTTCAG CCGCGATGGA GAACGGGTGG TCTCGGGCAG TTACGACAAG
ACCCTGCGCT TGTGGACGGT TGCCGCCGAT GATCCGACGA GTGTCGTACT CAACGGCTCC
GACAAGGCGC TCAAGAGCGT TGCCTTCAGT CCCGATGGCA CTCGGCTCGT TTGGGCGGGG
GAGGACCAGG ACGTCCACGT CCTGGATTTG ACGACCGGAA AGACCACTGG CAAGCCATTT
TCCGGACATC GGGAGGCTGT CTACAGCGTG GCGGTCAGCC CGGATAGCAA GCGCATCGCC
TCGGGCAGCA GCGACATGAG TGTGCGCTTG TGGGATGCTG CCACCGGCGC GCTCCTTGTT
CCCCCGCTGC AGGGACACCT TGGCACCGTC TACGGTGTGG CTTTTAGTCC AGATGGCGCG
CGCCTCGTAT CCGGCAGCGC GGATGGCACG CTGCGCCAAT GGAATGCCGG CAGCGGCGCC
CCGATCGGCA GTCCAATGAG CGGAGAGGGC GGAAGCGTCA GCAGTGTCGC TTTTAGCCGG
GATGGGCGAC GTATCGTTTC GGCCAGCGAG GATGGCAAGT TGCGCCTGTG GGATACGGCC
ACCGGGAAGC CGATTGGCAA ACCGCTCGTT GGGCACCTAA AAGCGGTCAA CAGCGTCGCC
TTCAGTCGGG ACGGGCGGCT TATCGTTTCA GCCAGCGACG ATATGAGCCT GCGCCTCTGG
GATGCGAACA GCGGTGCGCC GATCGGCAAG CCGCTGACCG GGCACACTCA TTACGTCAAC
AGCGTCGCCT TCAGTCCGGA TGGCCGATAC GTCGTTTCGG GAAGCAAGGA CCAGACATTG
CGCCTGTGGG ATGTCCGGAC CGGCACGCCG GTCGGTGCCC CGCTGGAGGG GCACAGTGAT
GTCATTTTTG GTGTGACCTT CAGCCCGGAT GGCCGACAGG TGGCTTCGGT CAGTGGCGAT
TCGAGCCTGC GTCGCTGGCC AGTACTCGAG TCATGGGCTG AACGCCTGTG CGCCAAACTC
GGCCGCAACA TGAGCGATAG CGAATGGCAG CGTCTGGTGT CACCGGATAT CCCGTATGCC
AGGCAGTGTC CCGGACTGCC CAAGCCTGGT GATTGA
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| Protein sequence | MAPPVIDRNN PWPWLDPFTE KAEAFFNGRD DDSAALQRCV LAGVATVLFG KSGLGKTSLL
QAGLFPRLRK SGLLPVLVRL EHGSASPTAA AQIRTCLHKE CTAYGLTMPG NPQFAPQLEK
PEDRLWLDLH TNPVGLRDAH GQTWQVVFVL DQFEEIFTLG GQDSERQRLD FGALGDLVEN
RIPRALENAI SVDEDLLDEL RLDVQPYRVV FSLREDYLPN LERWCDRIPR LGPNRYRLLP
MQEAQALDAI RLTGGDLVSP QDADRIVRFV SSQQEGPAVG MASGESAEVS IEPALLSLLC
SGLNLERQKA GAAHLDASNL EQSGGRIMER FYDDATLDVA PAAIAFVEDE LITPDGVRLF
YPLKSILQNP GITKADIDTL IERRLLRRQP FTEGDRIELV HDRLAAVARQ RRRNRESVAA
QQRRLDEARR EAAAKEANVR ADLESKARES ETRARLRAEK DASSQRRLQG ILKFVVAALV
VLLCLAGASA WFAREQSALA RAAEGKAKRS AEEASIRRLV AEGQAMTTGA QSGGSILGIL
QLLAAHRLSD EAYPQASPGA LGALRAEFMR SARLLHLSES DEAITTLDLS PDGLRIVTGS
RNGSLQLWEA ASGAPIGKPL IGHSSYVNSV AFSPDGKAIV SASRDHTLRL WEAGTGNPLG
KPLQSDSAVC SVAFSPLGQR IVAGGLDGNL RLWDAATGQM LGEPLKGHSQ RVCAVAFSPD
GQHIVSGGDD KTLRLWNVSS GQPSGEVLKG HTEAVYSVAY SPNGLRIVSG SSDATLRLWD
ARTGKPIGDP LKRHRKAILG VAFSPDGRYI VSGSGDYTVR LWETETQKPA GDSLRGHTDE
ITGVLFSRDG ERVVSGSYDK TLRLWTVAAD DPTSVVLNGS DKALKSVAFS PDGTRLVWAG
EDQDVHVLDL TTGKTTGKPF SGHREAVYSV AVSPDSKRIA SGSSDMSVRL WDAATGALLV
PPLQGHLGTV YGVAFSPDGA RLVSGSADGT LRQWNAGSGA PIGSPMSGEG GSVSSVAFSR
DGRRIVSASE DGKLRLWDTA TGKPIGKPLV GHLKAVNSVA FSRDGRLIVS ASDDMSLRLW
DANSGAPIGK PLTGHTHYVN SVAFSPDGRY VVSGSKDQTL RLWDVRTGTP VGAPLEGHSD
VIFGVTFSPD GRQVASVSGD SSLRRWPVLE SWAERLCAKL GRNMSDSEWQ RLVSPDIPYA
RQCPGLPKPG D
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