Gene Daro_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3553 
Symbol 
ID3566365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3806252 
End bp3807406 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content57% 
IMG OID637682026 
Productresponse regulator receiver 
Protein accessionYP_286752 
Protein GI71909165 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value0.739627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC TGATCAATCA GCAGCATGAA ATGACCATTC TGGTCGTTGA TGACACGCCG 
TTCAATTTGA CGTTGATGTC AGCCGTTCTC AAGAAGCATT ACAACGTCAA GGAGGCGTCT
TCTGGGATTG ATGCGCTGAC GATGATTCGC TCGGGGCCGC TGCCTGATCT CATCCTGCTC
GACATCATGA TGCCCAAAAT GGATGGCTAC GAGGTCTGTC GCCAGATCAA GGCCGATCCG
GCCACGGCCA ATGTGCCGGT GATTTTCCTG ACCGCGAACG TGTCCAGCGA CGATGAAGAA
AAGGGCTTTG CACTGGGGGC GGTTGACTAC ATCACCAAGC CGATCAGGCA GCGCGTGGTG
CTTGCCCGGA TCAAGACCCA TCTTCAACTC AAGGCTTCGG CGGATTTCCT CGAGGACAAG
GCGGCTTTCC TCGAAAACGA GGTGGCCCGG CGTTCCCGGG AGATCGAGGC GATCCAGGAT
GTGACCATCC TCGCCATGGC TTCGATGGCC GAAACGCGGG ATAACGAAAC CGGCAATCAC
ATTCGACGTA CCCAGTTCTA CGTGCGCGCC CTGGCCGACA AGTTGAAAAA GCATCCGCGG
TTTTCGTCCT TCCTGACCGA ACGGTGCATC AACATGCTGT TCAAGTCGGC TCCCTTGCAC
GATATCGGCA AGGTGGGCAT CCCCGATCAC ATCCTGCTCA AGCCCGGTCG CTTCACGCCG
GAAGAGTTCG AGCTCATGAA GGCGCATACC ACCCTGGGAC GCGATGCGAT TATCAATGCC
GAGCGGAGAC TCGGAATCAG CGTCGATTTC TTGAACCACG CCAAGGAGAT CGCCTACAGC
CACCAGGAAA AATGGGACGG CAGCGGCTAT CCGGAGGGCT TGGCCGGTGA TGCGATCCCG
ATATCGGCGC GCATCATGGC CGTGGCCGAT GTCTATGACG CACTGATCAG CCGCCGCCCG
TATAAGAATC CTTTTCCGCA CGACAAGGCG GTACAGATGA TCATCGACGG GCGAGGCAGC
CACTTCGACC CCGATATGGT TGATGCCTTT GTCGAATTGC AGGATGAATT CCTCGCCATC
AGCCAGCGTT ATGCCGACAG CGAGGAAGAA ATCGAGGAAA AAACCCGCCA GATCGAGCGG
ATGCGCGGCG CCTGA
 
Protein sequence
MQNLINQQHE MTILVVDDTP FNLTLMSAVL KKHYNVKEAS SGIDALTMIR SGPLPDLILL 
DIMMPKMDGY EVCRQIKADP ATANVPVIFL TANVSSDDEE KGFALGAVDY ITKPIRQRVV
LARIKTHLQL KASADFLEDK AAFLENEVAR RSREIEAIQD VTILAMASMA ETRDNETGNH
IRRTQFYVRA LADKLKKHPR FSSFLTERCI NMLFKSAPLH DIGKVGIPDH ILLKPGRFTP
EEFELMKAHT TLGRDAIINA ERRLGISVDF LNHAKEIAYS HQEKWDGSGY PEGLAGDAIP
ISARIMAVAD VYDALISRRP YKNPFPHDKA VQMIIDGRGS HFDPDMVDAF VELQDEFLAI
SQRYADSEEE IEEKTRQIER MRGA