Gene Daro_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3536 
Symbol 
ID3567614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3788325 
End bp3788876 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content61% 
IMG OID637682009 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_286735 
Protein GI71909148 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0378463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA AACTCGTCAT CCTCGACCGC GACGGCGTCA TCAACTTCGA CTCGGCCCAG 
TTCATCAAGA ACCCGGCCGA GTGGAAGCCG ATTCCCGGCA GCCTGGAAGC GATCGCCCGC
CTCAGCCAGA GCGGCTACAA GGTGGTCGTC GCGACCAACC AGTCGGGTGT CGGGCGCGGC
TTGTTCGACA TGGAAACCCT GAACCAGATC CACACCAAGA TGCACAAGGC TGTCGTGGCC
CTGGGCGGTC GGATTGATGC GATTTTCTAC TGCCCGCACG CGGCCGATTC GAAGTGCGAT
TGTCGCAAGC CGAAACCTGG CATGTTCAAG CGCATTTCGG AAACGCTGAA TGTCGACCTG
AAGGGCGTGC CGGCCATTGG TGATTCACTG CGCGACCTGC AGGCCTGCGC CGCTGCCGGT
TGCCTGCCCA TGCTGGTGCT GACCGGCAAG GGCGAGAAAA CCAAGACCGA GGGTAACCTG
CCCGAAGGTA CGCTGGAATT CAAGGACCTT TCGGCCGCTG TCGACTCCAT CCTCCAGGAA
ACCACGCCAT GA
 
Protein sequence
MPTKLVILDR DGVINFDSAQ FIKNPAEWKP IPGSLEAIAR LSQSGYKVVV ATNQSGVGRG 
LFDMETLNQI HTKMHKAVVA LGGRIDAIFY CPHAADSKCD CRKPKPGMFK RISETLNVDL
KGVPAIGDSL RDLQACAAAG CLPMLVLTGK GEKTKTEGNL PEGTLEFKDL SAAVDSILQE
TTP