Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3486 |
Symbol | |
ID | 3566946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3733463 |
End bp | 3734590 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637681958 |
Product | hypothetical protein |
Protein accession | YP_286685 |
Protein GI | 71909098 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.12464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATATTC GCCGCGACCC GGCCAGAAAT ACACTGGCCA TCCTCTGCAT CCTCGGGCTG ATCGGCCTGT CGGTCTGGGT GTTGCTGCCT TTTCTGGCGG CGACGGTGTG GGCGGTGATG ATAGTCGTGG CGACCTGGCC TTTGTTCAAG TCGCTGGAGT CGCGTCTGGG TAATCGACGG GCGCCGGCGG TGGTGCTGAT GTCGGTGGCC ATGCTCCTGT TGCTGGTGCT GCCGCTTTGG CTGGCGGTCG ATACCATCAT TGAGCATTCC GGGCAGCTGG CCGCCGCCGG CAAATCGATG GCGGCCAACG GTCTGCCGCC ACCACCCGCC TGGGTCAAAA CGCTGCCGCT GGTCGGTGAC CGCGTGGCAA GCGCTTGGGC GCAACTGGAT GCGGCCGGAA CGAGCGGTAT TGTTACGAAA GTGACGCCTT ACGCCGCCGA TACGGGTAAG TGGGTGCTCG CTCAGGCCGG TAGTGTTGGT GGCATGCTGA TCCAGTTCCT GCTGGTCGTG ACCATTGCGG CCATCCTCTA TTCCGGTGGC GAAACAGGGG CGCGCACGGC CCGTCGTTTC GGCCGTCGTC TGGCCGGCGA CCGGGGCGAA AACTCGATCA TTCTGGCCGG GCAGGCGATT CGTGGCGTGG CGCTGGGGGT TGGGGTGACC GCCATCGTCC AGACCGTGCT TGGCGGCGTC GGGCTGGCTG TGGCTGGCGT GCCGTTCGCC TCATTGCTAT CGGCCGTCAT GCTGATGCTG TGCATCGCCC AGATTGGCCC GATGCTGGTG CTGCTGCCGG CAGTGGGTTG GATGTACTGG ATGGGGGATA GTGGCTGGGC GACCTTACTG CTGGTCTGGA GCCTGATCGT CGGCAGCCTC GATAACTTCC TGCGGCCGAT GCTGATCAAG CGTGGTGCCG ACTTGCCGCT GCTGCTGATT TTTGCCGGGG TGATCGGCGG TATGCTGAGC TTTGGCCTGA TCGGCATCTT CGTCGGCCCG GTCGTGCTGG CCGTCACCTA TACGCTGACC CTGGCCTGGA TCGAGGATGC GCTGGGCAAG GACGAGCCTG AATCTATCCC CGAACTGCTG CCGTCAGAGC TTCCTGAGCC GGATCATCCG GAACCATCCG CCGGCTAG
|
Protein sequence | MDIRRDPARN TLAILCILGL IGLSVWVLLP FLAATVWAVM IVVATWPLFK SLESRLGNRR APAVVLMSVA MLLLLVLPLW LAVDTIIEHS GQLAAAGKSM AANGLPPPPA WVKTLPLVGD RVASAWAQLD AAGTSGIVTK VTPYAADTGK WVLAQAGSVG GMLIQFLLVV TIAAILYSGG ETGARTARRF GRRLAGDRGE NSIILAGQAI RGVALGVGVT AIVQTVLGGV GLAVAGVPFA SLLSAVMLML CIAQIGPMLV LLPAVGWMYW MGDSGWATLL LVWSLIVGSL DNFLRPMLIK RGADLPLLLI FAGVIGGMLS FGLIGIFVGP VVLAVTYTLT LAWIEDALGK DEPESIPELL PSELPEPDHP EPSAG
|
| |