Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3461 |
Symbol | |
ID | 3567329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3711098 |
End bp | 3712252 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637681933 |
Product | secretion protein HlyD |
Protein accession | YP_286660 |
Protein GI | 71909073 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCA CTGTCATCCT GGTTGCCGTC ATCGCCGTTC TCGGCCTTGG CCTGTTCTGG TTCAGCCGCC CGAAGCCGAT CCCTGTCGTC CTCAAGGAAG TCGCCGAAGG CAAGGTCGAG GCGACGCTGG CCAACACCCG GGCCGGCACG GTCGAAGCCT GCCAACGTAC CAAGCTGTCG ACGATCATCG GCGGTCGCAT CGAATATCTC GGCATCAAGG AAGGCGACAG GGTCAAAAAG GGCCAGTTGC TGCTCAAGTT GTGGAACGAT GACCAGCAAG CCAACACGGC ACTGGCCCAG GCCCAGATCA CGCTGAGCGC CAAGCGCGCC GAGGAAGCCT GCATTGCTGC GCTCAACGCC GAAAAGGAAG CGGTCCGCCA ATCCGAACTG CGCGCCAGAG GCTTTGTCTC GCCCAGTCGT GAAGAATCCG CCCGAACCGA TGCCGAGGTA CGTCGCGCTT CCTGCAACAC CGCCAAGGCC GACATTGCCC AGGCCGAAGC CAAGCTCAAG GCAACCCGTG TCGAGCAGGG TCGCGTTGCG CTCTTCGCCC CGTTCGACGG CACGGTCGCC AAGATCGTCG GCGAGCTCGG CGAATATTCC ACCCCCTCGC CCCCTGGCGT ACCGACCCCG CCCGCCATCG ATTTGATTGA CGACTCCTGC CTCTACGTCA AGGCACCGAT GGACGAGGTC GACGCCCCGA AAATCCAGAG TGGCCAACCG GTCCGCATCA CGCTCGATGC CATGCCCGGA AAAATCATCC CCGGCAAGGT CCGACGTGTC GCCCCCTACG TTTCTGCCGT TGAAAAACAG GCGCGCACCG TCGATATCGA GGTGGATTTC GATCGACCGG ACGATGCCGG AAAATTGTTG GTGGGTTATA GCGCCGACGT CGAGATCATC CTCGCCGGCC ACGACAAGGC GCTGCGCATT CCCTCTTCGG CAATCCAGGA GGGCGGCAAA GTGCTGCTCT TCAATGCCGA TAGCGGCAAG CTGGAAGAAC GCCAGATCAA GGCCGGCCTC GCTAACTGGG AACACACCGA GGTACTTGAC GGCCTGAAGG CCGGCGAGCG CATTGTCACC TCGCTCGACA AGGAAGGGGT CAAAGCCGGT GCCGTAGTGA CGCCAGACGA GAAAACCCAA GCCAAGGTGA AATAG
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Protein sequence | MRRTVILVAV IAVLGLGLFW FSRPKPIPVV LKEVAEGKVE ATLANTRAGT VEACQRTKLS TIIGGRIEYL GIKEGDRVKK GQLLLKLWND DQQANTALAQ AQITLSAKRA EEACIAALNA EKEAVRQSEL RARGFVSPSR EESARTDAEV RRASCNTAKA DIAQAEAKLK ATRVEQGRVA LFAPFDGTVA KIVGELGEYS TPSPPGVPTP PAIDLIDDSC LYVKAPMDEV DAPKIQSGQP VRITLDAMPG KIIPGKVRRV APYVSAVEKQ ARTVDIEVDF DRPDDAGKLL VGYSADVEII LAGHDKALRI PSSAIQEGGK VLLFNADSGK LEERQIKAGL ANWEHTEVLD GLKAGERIVT SLDKEGVKAG AVVTPDEKTQ AKVK
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