Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3310 |
Symbol | |
ID | 3566490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3560036 |
End bp | 3561559 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637681783 |
Product | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal |
Protein accession | YP_286510 |
Protein GI | 71908923 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0221884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA TCAATACCTT AGCTGGCGAG AACGCCATCA TCATCGCTGC CGACGCAGTG CCTGAAATCA CCTTTGCCGA CCTCGGCCTG GCGCCTGAAC TCCTGCGCGC CGTGCTCGAC GAGGGCTATA CGAAGCCGAC GCCGATTCAG GCCCAGGCCA TCCCCCTCGT CATTTCCGGC AAGGACATCA TGGGCGGCGC CCAGACCGGC ACCGGCAAGA CAGCGGCCTT CACGTTGCCC ATCCTGCAGC GCATCCTGCC CTTTGCCAGC AGCAGCCCGT CGCCGGCCAA GCATCCAGTG CGAGCCCTGA TCCTGGCGCC GACCCGCGAA CTGGCCATGC AGGTCTTCGA GTCGGTCAAG ACCTACAGCA AGCACACGCC GATCCGTGCG ATGTGCGCCT ATGGCGGCGT CGATATCCGG CCACAGATCG CCGAACTGAA AAAGGGCGTC GAAATTCTCG TCGCCACCCC CGGCCGCCTG CTTGATCACG TCGAAAACAA GAGCGTCAGC TTCAATTCCG TTCAGGCCCT GGTCCTCGAC GAAGCCGACC GCATGCTCGA CATGGGCTTC GTCCCGGACG TCACGCGCAT CCTCAACATG CTGCCGGCCC AGCGCCAGAG CCTGCTGTTC TCTGCCACCT TCTCGGAAGA AATCAAGAAG CTGGCCGACA CCATGCTGAA GTCGCCGATC CTGATCGAGG TCGCTCGGCG CAATCAGGTC TCCGACACCA TCACCCACCG CGTCCATCCG GTCTCCGAAT ACGGCAAGCG CGGCCTGCTG ACCAAGCTGC TGAAGTCTGG CGAAATCCGC CAGTGCATCG TCTTCTGTCG CACCAAGCAG GGCTGCTCGC GCCTGACCCG CGAACTGCAA CGCGCCGGCA TCAAGGCCGA TGCCATCCAC GGTGACAAGA GCCAGCTTGA ACGCATCAAG GCGCTCGAAG CCTTCAAGGG CGGCGAAACC GATGCCCTGA TCGCCACCGA TGTCGCGGCC CGTGGCCTGG ACGTTGACGA CCTGCCCTAC GTCATCAATT ACGAACTGCC GCACACCCCG GAAGACTACG TGCACCGCAT CGGCCGCACT GGCCGCGCCG GCAAGAAGGG CAATGCCATT TCGCTGGTCA GCGCGCACGA GGTCTGCTAC CTGGTCGATA TTGAAAAACT GATCAAGCGC CCGATCGAAC AGGTTGAAGT TGCCGGTTTC GAACCGGAGC CGGAATACGA ATACCCTCCG GGCAACAAGC GCAAGCGTTC GGCGGCACCG CCGGCAAAGG CCCCCGTTGC CCACCGCCCA GAACGTCCGG AACGCTCCGA GCGCTCCGAA CGGCCGGATC GGGGTGATCG TGACCGCCGC CCGCCGCGCC GTAATCCGAT GATTGCCGCC GATGGTTTCG ACTTCAGCAA GCCCTACGAA GACAACTCGC CACGCGGTGA AGTGCCTGAC TCACCGCAAG CCCCCTCGAA GGTCGATCCG CACAAGCCGA AGCGGGTCGT TGCCGCGCTG CTTGGCGGGC TTGGGCGCAA GTAA
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Protein sequence | MSEINTLAGE NAIIIAADAV PEITFADLGL APELLRAVLD EGYTKPTPIQ AQAIPLVISG KDIMGGAQTG TGKTAAFTLP ILQRILPFAS SSPSPAKHPV RALILAPTRE LAMQVFESVK TYSKHTPIRA MCAYGGVDIR PQIAELKKGV EILVATPGRL LDHVENKSVS FNSVQALVLD EADRMLDMGF VPDVTRILNM LPAQRQSLLF SATFSEEIKK LADTMLKSPI LIEVARRNQV SDTITHRVHP VSEYGKRGLL TKLLKSGEIR QCIVFCRTKQ GCSRLTRELQ RAGIKADAIH GDKSQLERIK ALEAFKGGET DALIATDVAA RGLDVDDLPY VINYELPHTP EDYVHRIGRT GRAGKKGNAI SLVSAHEVCY LVDIEKLIKR PIEQVEVAGF EPEPEYEYPP GNKRKRSAAP PAKAPVAHRP ERPERSERSE RPDRGDRDRR PPRRNPMIAA DGFDFSKPYE DNSPRGEVPD SPQAPSKVDP HKPKRVVAAL LGGLGRK
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