| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3303 |
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| Symbol | alaS |
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| ID | 3566483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3551266 |
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| End bp | 3553881 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637681776 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_286503 |
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| Protein GI | 71908916 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.243985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCT CCGAAATCCG CCAGCAGTTC CTCGACTTCT TCGCCTCCAA GGGCCACCAG
ATCGTTTCTT CCAGTTCGCT GGTGCCGCAT GAAGACCCGA CCCTGTTGTT CACCAACGCC
GGGATGAACC AGTTCAAGGA CGTTTTCCTC GGTTTTGACA AGCGCCCCTA CAGCCGTGCC
ACGACCTCGC AGAAATGCGT CCGCGCCGGC GGCAAGCACA ACGACCTCGA AAACGTCGGC
TACACCGCCC GTCACCACAC CTTCTTCGAG ATGCTCGGCA ATTTCAGTTT CGGCGACTAC
TTCAAGCGCG ATGCCATCAA GTACGCCTGG GAGCTGCTGA CCGAGGTCTA CAAGCTGCCC
AAGGACAAGC TGACCGTCAC GGTTTACGCC GAGGATGACG AAGCCTACGA CATCTGGACC
AAGGAAATCG GCGTGCCGGT CGAGCGCGTC ATCCGCATTG GTGACAACAA GGGCGCCCGC
TACGCTTCCG ACAATTTCTG GATGATGGGC GACACCGGTC CCTGCGGCCC GTGCACGGAA
ATCTTCTACG ACCACGGCGA AAAGTACTGG GGTGGCCCTC CGGGATCGCC GGAAGAAGAC
GGTGACCGTT TCATCGAAAT CTGGAACAAC GTTTTCATGC AATTCAACCG CGACGAAGCC
GGGGTCATGC ATCCGCTGCC CAAGCCGTCC GTCGACACCG GCATGGGCCT GGAGCGTGTT
TCCGCCGTGC TGCAGGGCGT GCATGCCAAC TACGAGATCG ATCTGTTCCA GGCGCTGCTC
AAGGCTGCTG CACGCGAAAC CAGCGATGCC GATCTCGACA GCCCGTCGCT GAAAGTGCTG
GCCGACCATA TTCGCGCCTG CTCCTTCCTG CTTGCCGATG GCGTCATTCC GGGCAACGAA
GGCCGCGGCT ACGTGCTGCG CCGCATCATC CGCCGTGCCA TCCGCCACGG CTACAAGCTC
GGCGCCCGCG CTGCCTTCTT CCACAAGATG GTGCCCGACC TCGTTGCCGA AATGGGCATG
GCCTATCCGG AACTGGGCCA GAATCAGGCC AAGATTGTCG CTACATTGAA GCAGGAAGAA
GACCGCTTCT TCGAAACCAT CGAGCACGGC ATGGCCATCC TCGAAGGCGA ACTGAAGTCG
CTGGGCGAAG GTGGGGTTTT CAACGGCGAT ACTGCGTTCA AGCTGCACGA TACTTACGGC
TTCCCGCTCG ACCTGACGCA GGACATCTGC CGCGAACACA AGATCACTGT CGATGCCGCC
GCCTTCGATG CGGCGATGGC TCGCCAGAAG GAGCAGGCGC GCGCCGCCGG CAAGTTCAAG
ATGGCGACCA ACCTCGAATA CGACGGTCCG GCCACGACCT TTCACGGTTA CGCCGCGCTG
GAATACAAGG CCAACGTGCT CGCCCTGTAC AAGGACGGTA TTGCAGTCAA TCAGCTCAAC
GAAGGCGAAA TGGGTGTCGT CGTCCTTGAC GACACGCCGT TCTACGCCGA ATCCGGCGGC
CAGGTGGGCG ACTGCGGCGC CCTGCAGTCG GTGCATGGCA TCTTCGCCGT CGAAGATACG
CAGAAGATTC AGGCCACCGT CTTCGGCCAC CATGGCGTGG TCAAGACCGG CACTATCACG
GTTGGCAACG GCGTTGCCGC CAAGGTCGAT GTGCAAGCCC GTCAGCGCAT CATGCGCAAC
CACTCGGCGA CCCACCTGCT GCACAAGGCG CTGCGCGAAG TGCTCGGCGA CCACGTCCAG
CAAAAGGGCT CGCAAGTCGA TCCGGACAAG ACCCGCTTCG ACTTCGTTCA TAACCAGCCG
ATGACCGACG AGGAAATCCG CCGCGTCGAG AACATCGTCA ATGCCGAAAT TCTCGCCAAC
GTGGCGACCG AAACCCGCGT CCTGCCCATC GCCGAAGCCC AGAAGCTCGG CGCCATGATG
CTCTTCGGTG AAAAGTATGG TGACGACGTG CGCGTCCTCG ACATCGGTTC CTCGCGCGAA
CTGTGCGGCG GAACCCATGT TTCGCGCACC GGCGACATCG GCCTGTTCAG CATTACGGCC
GAGGGCGGTG TGGCAGCGGG TGTGCGCCGT GTCGAGGCGG TGACTGGCGA CAATGCGCTG
GCTTATATGC AGGACATGGA AAGCGCGCTT GGCGGTGTCG CCGGCACGCT CAAGGTGCTG
CCCAAGGACG TCCATGGCCG CGTGCTGGCC GTGCTCGATC AGGTCAAGAA ACTGGAACGC
GAACTGGCGG CCCTCAAGGG CAAGCTGGCC TCGGCGCAAG GTGACGACAT GCTGTCGAAC
GCCGTCGACA TCAAGGGCGC CAAGGTGCTG GCAGCGACGT TGGAAGGGGC TGACGTCAAT
GCGCTGCGTG AAACCATGGA CAAGCTGAAG GACAAGTTGA AGTCGGCGGC CATCGTGCTC
GCCTCTGTCG CAGACGGCAA GGTGACGCTG ATTGCTGGCG TGACGGCTGA CCTGACCGGC
AAGGTCAAGG CCGGCGAACT GGTCAATCTG GTCGCCCAGC AGATCGGCGG CAAGGGCGGC
GGTCGTCCGG ACATGGCGCA GGCTGGCGGT ACGCAGCCGG AAAATCTGCC GGCTGCGCTG
GCTTCCGTAG CAGGCTGGGT CGAAGGCAAA CTGTGA
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| Protein sequence | MKSSEIRQQF LDFFASKGHQ IVSSSSLVPH EDPTLLFTNA GMNQFKDVFL GFDKRPYSRA
TTSQKCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKRDAIKYAW ELLTEVYKLP
KDKLTVTVYA EDDEAYDIWT KEIGVPVERV IRIGDNKGAR YASDNFWMMG DTGPCGPCTE
IFYDHGEKYW GGPPGSPEED GDRFIEIWNN VFMQFNRDEA GVMHPLPKPS VDTGMGLERV
SAVLQGVHAN YEIDLFQALL KAAARETSDA DLDSPSLKVL ADHIRACSFL LADGVIPGNE
GRGYVLRRII RRAIRHGYKL GARAAFFHKM VPDLVAEMGM AYPELGQNQA KIVATLKQEE
DRFFETIEHG MAILEGELKS LGEGGVFNGD TAFKLHDTYG FPLDLTQDIC REHKITVDAA
AFDAAMARQK EQARAAGKFK MATNLEYDGP ATTFHGYAAL EYKANVLALY KDGIAVNQLN
EGEMGVVVLD DTPFYAESGG QVGDCGALQS VHGIFAVEDT QKIQATVFGH HGVVKTGTIT
VGNGVAAKVD VQARQRIMRN HSATHLLHKA LREVLGDHVQ QKGSQVDPDK TRFDFVHNQP
MTDEEIRRVE NIVNAEILAN VATETRVLPI AEAQKLGAMM LFGEKYGDDV RVLDIGSSRE
LCGGTHVSRT GDIGLFSITA EGGVAAGVRR VEAVTGDNAL AYMQDMESAL GGVAGTLKVL
PKDVHGRVLA VLDQVKKLER ELAALKGKLA SAQGDDMLSN AVDIKGAKVL AATLEGADVN
ALRETMDKLK DKLKSAAIVL ASVADGKVTL IAGVTADLTG KVKAGELVNL VAQQIGGKGG
GRPDMAQAGG TQPENLPAAL ASVAGWVEGK L
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